Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03726 ATGAAAGATGGTAAAATTACTCAATGTGGAAAGTATACTGATTTGCTTAATTATGGAGCTGATTTTATGGAACTTGTTGGTGCACATAAAAAAGCTTTGTCTACGCTAGATTCATTGGATGGAGCAACAGTATCTAATGAAATAGGCACCTTGGAACAACATGTAAATGTCTCTGTCACGCAAGGTTCTAAAGATAAAGAAGAGGAGGCAAGTAAAGATGAACAAAATGGTAAAACAAATAAAAGTGAACCAAAACAATATTATATTCCAACGGCCAGAGAACTATCACGTTTAGTTGGCGTCTGCAAAGCCCCAAACATTCAACACTTTTCTGAAACAATTTCTGGTACTTCAACCATTAGAAGCTTTGATCAGCAATCAAGATTTCAGGAAACAAATATGAAGCTGACCGATGGGTATTCTCGGCCAAAGTTTAATATTGCTGGTGCTATGGAATGGTTGTCCATACGCTTAGAAATGTTGTCTTCTATCACATTTGCCTTTTCCTTAATATTTTTAATATCTATTCCAGCGGGATTCATAGATCCAGGTGTGTTATTCCAATCTGGCCTTGCTGGTTTAGCGGTTACTTATGGACTAAATTTGAACATAATACAAGCTTGTGAACCTCCCCTTGTTGTAGATGAAAATCGGCCAGATCCTTCTTGGCCCTCAAATGGCGAGGTTGATATTCAAGATTTGCAGGTTCGTTATGCTCCACATCTTCCACTTGTGCTGCGTGGTATTACGTGCAAATTTCCAGGAGGACTGAAAACGGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATACAAACGCTTTTTCGAATTGTTGAGCCTGATGCCGGGCAAATTATGATTGACAACATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACAGTAAGAAATAATTTGGACCCCCTTGAAGAATACACTGATGATCAAATTTGGGAGGCCTTGGATAAATGTCAACTTGGAGACGAACTTAGAAAGAAGGAAGGAAAGCTCGACTCCAAAGTTAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGACAGTTGGTCTGTCTTGGAAGGGTTGTGCTTAAGAAAAGCAAGGTTTTGGTTCTTGATGAAGCCACTGCATCTGTGGATACAGCTACGGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCACTCACTCCACAGTTATTACCATTGCACATCGAATAACTTCAGTTCTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTTATTGAGGAGTATGACACCCCAACAAGGTTGCTAGAGAACAAGTCATCATCTTTTGCTCAACTTGTTGCTGAGTATACCGTGAGGTCCAACTCCAGTATGGAGAAAGCCGATGATCACTGA 1440 0.4 MKDGKITQCGKYTDLLNYGADFMELVGAHKKALSTLDSLDGATVSNEIGTLEQHVNVSVTQGSKDKEEEASKDEQNGKTNKSEPKQYYIPTARELSRLVGVCKAPNIQHFSETISGTSTIRSFDQQSRFQETNMKLTDGYSRPKFNIAGAMEWLSIRLEMLSSITFAFSLIFLISIPAGFIDPGVLFQSGLAGLAVTYGLNLNIIQACEPPLVVDENRPDPSWPSNGEVDIQDLQVRYAPHLPLVLRGITCKFPGGLKTGIVGRTGSGKSTLIQTLFRIVEPDAGQIMIDNINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDDQIWEALDKCQLGDELRKKEGKLDSKVSENGENWSMGQRQLVCLGRVVLKKSKVLVLDEATASVDTATDNLIQQTLRQHFTHSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLLENKSSSFAQLVAEYTVRSNSSMEKADDH* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03726 479 FunFam ABC transporter C family member 3 212 464 - -
Phac8g03726 479 Pfam ABC transporter transmembrane region 87 175 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g03726 479 Gene3D - 212 465 IPR027417 -
Phac8g03726 479 MobiDBLite consensus disorder prediction 61 80 - -
Phac8g03726 479 Gene3D ABC transporter type 1, transmembrane domain 85 206 IPR036640 GO:0005524|GO:0016020
Phac8g03726 479 CDD ABCC_MRP_domain2 227 447 - -
Phac8g03726 479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 87 201 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g03726 479 SMART AAA_5 255 448 IPR003593 GO:0016887
Phac8g03726 479 Pfam ABC transporter 246 394 IPR003439 GO:0005524
Phac8g03726 479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 229 463 IPR003439 GO:0005524
Phac8g03726 479 MobiDBLite consensus disorder prediction 58 86 - -
Phac8g03726 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 460 IPR027417 -
Phac8g03726 479 SUPERFAMILY ABC transporter transmembrane region 87 202 IPR036640 GO:0005524|GO:0016020
Phac8g03726 479 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 86 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03726 Phac-Chr8 43628935 43631593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03726 227 476 Calmodulin-binding Proteins AT2G36910 27.953 1.64e-30 124