Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03713 ATGCAAATGTCTCAAAAACATAAAATGTCCTATGAGCCTGTCCAAAATTTTGGGTCATGCTGCTTCCTACAAAGTGAGAACCTAGACTACTATTCATCCTCTGATAACAGTGGCCATGCAACCTACCCTTCTGTTCTTACTTCACAACAATATTGCACCCTGGAATCTTCTACAAAGAACAGTTTTCCTTCCCTTAATTCCCCATCTACTGTCAGTTTCTCACCTAACAATAGCCCAGTCTCAAAGCTACAGCCGAAATCATATGTGTTGAGTTCACAGAATTCTCTTGAAATGGCTAATGATTCACTAGAAAATGAATCTTGTTTGACTCATAATGACAATGAGCTGAGGCACAAGATAAGAGAGCTTGAAAGTGTTATGTTGGGACATGATACAGATATTCTGGACATGTATGATCCTGTACTTCCAGAGGAATCTGAGTCATTTCTGCTAGAGGCAGAAAGGTGGAAGAAAATGATGGAAATGATATCTCGAGGGGATTTGAAAGAGATGCTTTGTACATGTGCAATAGCAGTGGCAGGAAATGATATGGAGACAACTGAATGGTTGATGTCAGAGTTAAGGAAAATGGTCTCCATTTCTGGCAATCCAATCCAAAGATTGGGAGCATACATGCTTGAGGCTCTTGTTGCAAGACTTGCCTCTTCAGGAAGCACAATCTACAAAGCCTTGAAATGTAAAGAGCCTAGTGGTAAAGAACTCCTTTCACACATGCATCTACTTTATGAAATCTGCCCATATCTCAAATTTGGGTACTTGTCAGCAAATGGAGCTATTGCTGAAGTGATGAAGGAGGAAAATGAAATCCACATTATTGATTTTCAGATCAACCAGGGAATACAATGGGTGAGCCTAATTCAAGCTCTTGCTGGCAGACCTGGAGGACCCCCCAAGATCAGAATAACAGGTTTAGATGACTCCACTTCAGCTTATGCCAGAGAAGGAGGCCTTGAAATAGTGGGAGAAAGGTTGTCAACACTTGCACAATCATATAATGTACCCTTTGAGTTCCATGCCTTGGAAGTTGCTCCCACTGAGGTTGAAATTAAGGACCTCAAACTTCGACCTGGTGAAGCTATTGCTGTGAATTTTGCCATGATGCTGCACCATCTTCCAGATGAAAGTGTGGATAGTCAGAATCATAGAGACCGGTTGCTGAGAATGGCAAAGTGTTTGTCTCCAAAGATCGTGGCACTAGTTGAGCAAGAATCACACACCAGCAACCTCCCATTCTTCCCCCGTTTTGTTGAGACAATGAACTACTACTTGGCTATTTTTGAATCAATTGATGTTGCTCTTCCAAGGGAGAACAAAGAAAGGATTAACGTGGAACAGCATTGTTTGGCTCGAGAAGTTGTCAACTTAGTAGCATGTGAAGGGGCAGAAAGAGTAGAACGTCACGAGCCTCTCAAGAAATGGAGATCACGTTTCACTATGGCTGGATTCTCACCATATCCGTTGAACTCCTATATTACTTGTTCCATTAAAAATCTTCAGCAAAGCTACCAAGGACATTACACTCTAGAAGAGAGAGATGGAACTCTATCTCTTGGTTGGATGAATCAAGTTCTTATTACTTCTAGTGCTTGGAGGTGA 1617 0.4162 MQMSQKHKMSYEPVQNFGSCCFLQSENLDYYSSSDNSGHATYPSVLTSQQYCTLESSTKNSFPSLNSPSTVSFSPNNSPVSKLQPKSYVLSSQNSLEMANDSLENESCLTHNDNELRHKIRELESVMLGHDTDILDMYDPVLPEESESFLLEAERWKKMMEMISRGDLKEMLCTCAIAVAGNDMETTEWLMSELRKMVSISGNPIQRLGAYMLEALVARLASSGSTIYKALKCKEPSGKELLSHMHLLYEICPYLKFGYLSANGAIAEVMKEENEIHIIDFQINQGIQWVSLIQALAGRPGGPPKIRITGLDDSTSAYAREGGLEIVGERLSTLAQSYNVPFEFHALEVAPTEVEIKDLKLRPGEAIAVNFAMMLHHLPDESVDSQNHRDRLLRMAKCLSPKIVALVEQESHTSNLPFFPRFVETMNYYLAIFESIDVALPRENKERINVEQHCLAREVVNLVACEGAERVERHEPLKKWRSRFTMAGFSPYPLNSYITCSIKNLQQSYQGHYTLEERDGTLSLGWMNQVLITSSAWR* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03713 538 ProSiteProfiles GRAS family profile. 159 538 IPR005202 -
Phac8g03713 538 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 114 532 IPR005202 -
Phac8g03713 538 Pfam GRAS domain family 169 538 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03713 Phac-Chr8 43546460 43549552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03713 44 538 GRAS Transcription Factor Family AT1G50600 59.082 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac8g03713 GRAS 7.4e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03713 - - gmx:100817120 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g03713 8 43546460 43549552 Phac8g03713 8 43546460 43549552 ECH
Phac6g00705 6 11778143 11782350 Phac8g03713 8 43546460 43549552 PCT