Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03709 ATGCAATATCAGCAGCGGGAGAAAGTGGAGTCTTCACCAACTACAGGGTCCCTCCGCAAGCTTCAACAAACAGTACATGGTTCTAAGGCTTCTGCTGCCTCTGCCACATTTGCAGTAACCACTTCATGCTTCAGTACCAATACTGTTGATGACAGGAAATCAAGCTTCTTTGAGTTTAAACCACTCAACAGGTTGAATATGGTTCCTGCAGACTTCAATAACCGTGCTATCAAACAATCAACTCAAGTAGAAGGTCTAGGAAAAGCTCAATCATTTGTTTCCTCGCCATTAGTTGAAAGTGAGATAGCAGTTCCTGCTAACGAATTAAGTCTATCATCACCTGTACAAATGGTTAGTTCTTGTCCTAGTGCTTCTGTTGATGTTGATTTGGATGACGTTAACCACAAAGGCAACACAGCTACTGGGCTTCAAGCATCACATGTGGATGTTAGAGGCAGTGGACTTTCAGTTGCAACTGAGAAAACATCTGATGACGGATACAATTGGCGAAAATATGGCCAAAAACTTGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTGAAAAAACTTTTTGAACGCTCTCATGATGGTCAAATTACTGAGATAATTTACAAGGGAACACATGATCATCCTAAGCCTCAACCAAGCTGCCGATACTCTACTGGTACTATTATGTCTATTCAAGTAGAGAGATCTGATAAGGCTTCTTCTTTGGCTGGCCTAGATGACAAAGCACCCTCCATGTATGGTCAGTTGTCCCATGCTGCTGAGCCCAACAGTGCTTCTGAGCCATCACCTGTAGCAACAAATGGTGATGGTTTAGAGGGTGTTGGGTTTGTGTCAAACAGGATTGGTGATGACGCTGATGATGATGATCCCTTCTCAAAGCGAAGAAAAATGGAACTTGGAAATGTTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTTTGAGTGAGGTTGATATCTTGGATGATGGGTATCGCTGGCGTAAGTATGGCCAAAAGGTGGTGAGAGGCAATCCTAACCCAAGGAGTTATTACAAATGCACAAATGCGGGTTGCCCTGTCAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCAGTGATAACCACATATGAGGGTAAACACAATCATGATGTACCAGCTGCAAGGAATAGCAGCCATGACATGGCAGTTGCAGCAGCTGGACAGACAAGAATTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGGATGGGCATTAGCTCAGCTGCTGAACATAGATCAAACGCACAAGGGAAAATAATGCACTCTGAATTTGGGAACACTCAAACTCACACAAGTAATTCCAATTTCAAGTTTGTTCATACTACCTCAGCTCCAGTATACTTTGGTGTTCTAAATAACAGCTCTAATACCTATGGTTCTAGAGACAATAGGAGTGATGGTCCAGCTTTAAACCATGCCTCGTATCCTTGCCCACAGAGCATGGGAAGAATACTAATGGGTCCAGGAAATTGA 1560 0.4295 MQYQQREKVESSPTTGSLRKLQQTVHGSKASAASATFAVTTSCFSTNTVDDRKSSFFEFKPLNRLNMVPADFNNRAIKQSTQVEGLGKAQSFVSSPLVESEIAVPANELSLSSPVQMVSSCPSASVDVDLDDVNHKGNTATGLQASHVDVRGSGLSVATEKTSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSCRYSTGTIMSIQVERSDKASSLAGLDDKAPSMYGQLSHAAEPNSASEPSPVATNGDGLEGVGFVSNRIGDDADDDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAVAAAGQTRIKLEESDTISLDLGMGISSAAEHRSNAQGKIMHSEFGNTQTHTSNSNFKFVHTTSAPVYFGVLNNSSNTYGSRDNRSDGPALNHASYPCPQSMGRILMGPGN* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03709 519 ProSiteProfiles WRKY domain profile. 334 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03709 519 FunFam WRKY transcription factor 33 326 392 - -
Phac8g03709 519 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 116 440 IPR044810 GO:0003700
Phac8g03709 519 SMART WRKY_cls 163 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03709 519 SMART WRKY_cls 339 398 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03709 519 Pfam WRKY DNA -binding domain 340 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03709 519 Pfam WRKY DNA -binding domain 164 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03709 519 ProSiteProfiles WRKY domain profile. 158 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03709 519 FunFam WRKY transcription factor 153 223 - -
Phac8g03709 519 Gene3D WRKY domain 324 400 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03709 519 Gene3D WRKY domain 154 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03709 519 MobiDBLite consensus disorder prediction 1 23 - -
Phac8g03709 519 SUPERFAMILY WRKY DNA-binding domain 159 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03709 519 SUPERFAMILY WRKY DNA-binding domain 331 399 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03709 519 MobiDBLite consensus disorder prediction 487 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03709 Phac-Chr8 43538022 43542421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03709 8 517 WRKY Transcription Factor Family AT4G26640 53.385 2.79e-161 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g03709 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03709 - - gmx:100816583 912.909