Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03708 ATGGTTCCTGCAGACTTCAATAACCGTGCTATCAAACAATCAACTCAAGTAGAAGGTCTAGGAAAAGCTCAATCATTTGTTTCCTCGCCATTAGTTGAAAGTGAGATAGCAGTTCCTGCTAACGAATTAAGTCTATCATCACCTGTACAAATGGTTAGTTCTTGTCCTAGTGCTTCTGTTGATGTTGATTTGGATGACGTTAACCACAAAGGCAACACAGCTACTGGGCTTCAAGCATCACATGTGGATGTTAGAGGCAGTGGACTTTCAGTTGCAACTGAGAAAACATCTGATGACGGATACAATTGGCGAAAATATGGCCAAAAACTTGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTGAAAAAACTTTTTGAACGCTCTCATGATGGTCAAATTACTGAGATAATTTACAAGGGAACACATGATCATCCTAAGCCTCAACCAAGCTGCCGATACTCTACTGGTACTATTATGTCTATTCAAGTAGAGAGATCTGATAAGGCTTCTTCTTTGGCTGGCCTAGATGACAAAGCACCCTCCATGTATGGTCAGTTGTCCCATGCTGCTGAGCCCAACAGTGCTTCTGAGCCATCACCTGTAGCAACAAATGGTGATGGTTTAGAGGGTGTTGGGTTTGTGTCAAACAGGATTGGTGATGACGCTGATGATGATGATCCCTTCTCAAAGCGAAGAAAAATGGAACTTGGAAATGTTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTTTGAGTGAGGTTGATATCTTGGATGATGGGTATCGCTGGCGTAAGTATGGCCAAAAGGTGGTGAGAGGCAATCCTAACCCAAGGAGTTATTACAAATGCACAAATGCGGGTTGCCCTGTCAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCAGTGATAACCACATATGAGGGTAAACACAATCATGATGTACCAGCTGCAAGGAATAGCAGCCATGACATGGCAGTTGCAGCAGCTGGACAGACAAGAATTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGGATGGGCATTAGCTCAGCTGCTGAACATAGATCAAACGCACAAGGGAAAATAATGCACTCTGAATTTGGGAACACTCAAACTCACACAAGTAATTCCAATTTCAAGTTTGTTCATACTACCTCAGCTCCAGTATACTTTGGTGTTCTAAATAACAGCTCTAATACCTATGGTTCTAGAGACAATAGGAGTGATGGTCCAGCTTTAAACCATGCCTCGTATCCTTGCCCACAGAGCATGGGAAGAATACTAATGGGTCCAGGAAATTGA 1362 0.4266 MVPADFNNRAIKQSTQVEGLGKAQSFVSSPLVESEIAVPANELSLSSPVQMVSSCPSASVDVDLDDVNHKGNTATGLQASHVDVRGSGLSVATEKTSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSCRYSTGTIMSIQVERSDKASSLAGLDDKAPSMYGQLSHAAEPNSASEPSPVATNGDGLEGVGFVSNRIGDDADDDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAVAAAGQTRIKLEESDTISLDLGMGISSAAEHRSNAQGKIMHSEFGNTQTHTSNSNFKFVHTTSAPVYFGVLNNSSNTYGSRDNRSDGPALNHASYPCPQSMGRILMGPGN* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03708 453 Gene3D WRKY domain 88 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03708 453 Gene3D WRKY domain 258 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03708 453 SUPERFAMILY WRKY DNA-binding domain 265 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03708 453 ProSiteProfiles WRKY domain profile. 268 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03708 453 FunFam WRKY transcription factor 87 157 - -
Phac8g03708 453 Pfam WRKY DNA -binding domain 274 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03708 453 Pfam WRKY DNA -binding domain 98 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03708 453 SUPERFAMILY WRKY DNA-binding domain 93 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03708 453 ProSiteProfiles WRKY domain profile. 92 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03708 453 SMART WRKY_cls 97 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03708 453 SMART WRKY_cls 273 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03708 453 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 64 374 IPR044810 GO:0003700
Phac8g03708 453 FunFam WRKY transcription factor 33 260 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03708 Phac-Chr8 43536306 43542421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03708 45 451 WRKY Transcription Factor Family AT4G26640 57.143 1.84e-151 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g03708 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03708 - - gmx:100816583 823.542