Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03707 ATGGACGCCGCCGCCGAGCCCGGCCCCAGTTCGGAGCTCCGGCTCAATGGGGCATCCGAGGATCCAAATCGAAGTGGGTCGGGTCAGAATTTGACGGCGAGGTACAAGCTGATTGCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGCATCACGATTCCCCCGGGACTGAGTCCGACGTCGTTTCTGGAATCACCGGTTCTTCTTTCCAATATGAAGGTGGAGTCTTCACCAACTACAGGGTCCCTCCGCAAGCTTCAACAAACAGTACATGGTTCTAAGGCTTCTGCTGCCTCTGCCACATTTGCAGTAACCACTTCATGCTTCAGTACCAATACTGTTGATGACAGGAAATCAAGCTTCTTTGAGTTTAAACCACTCAACAGGTTGAATATGGTTCCTGCAGACTTCAATAACCGTGCTATCAAACAATCAACTCAAGTAGAAGGTCTAGGAAAAGCTCAATCATTTGTTTCCTCGCCATTAGTTGAAAGTGAGATAGCAGTTCCTGCTAACGAATTAAGTCTATCATCACCTGTACAAATGGTTAGTTCTTGTCCTAGTGCTTCTGTTGATGTTGATTTGGATGACGTTAACCACAAAGGCAACACAGCTACTGGGCTTCAAGCATCACATGTGGATGTTAGAGGCAGTGGACTTTCAGTTGCAACTGAGAAAACATCTGATGACGGATACAATTGGCGAAAATATGGCCAAAAACTTGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTGAAAAAACTTTTTGAACGCTCTCATGATGGTCAAATTACTGAGATAATTTACAAGGGAACACATGATCATCCTAAGCCTCAACCAAGCTGCCGATACTCTACTGGTACTATTATGTCTATTCAAGTAGAGAGATCTGATAAGGCTTCTTCTTTGGCTGGCCTAGATGACAAAGCACCCTCCATGTATGGTCAGTTGTCCCATGCTGCTGAGCCCAACAGTGCTTCTGAGCCATCACCTGTAGCAACAAATGGTGATGGTTTAGAGGGTGTTGGGTTTGTGTCAAACAGGATTGGTGATGACGCTGATGATGATGATCCCTTCTCAAAGCGAAGAAAAATGGAACTTGGAAATGTTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTTTGAGTGAGGTTGATATCTTGGATGATGGGTATCGCTGGCGTAAGTATGGCCAAAAGGTGGTGAGAGGCAATCCTAACCCAAGGAGTTATTACAAATGCACAAATGCGGGTTGCCCTGTCAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCAGTGATAACCACATATGAGGGTAAACACAATCATGATGTACCAGCTGCAAGGAATAGCAGCCATGACATGGCAGTTGCAGCAGCTGGACAGACAAGAATTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGGATGGGCATTAGCTCAGCTGCTGAACATAGATCAAACGCACAAGGGAAAATAATGCACTCTGAATTTGGGAACACTCAAACTCACACAAGTAATTCCAATTTCAAGTTTGTTCATACTACCTCAGCTCCAGTATACTTTGGTGTTCTAAATAACAGCTCTAATACCTATGGTTCTAGAGACAATAGGAGTGATGGTCCAGCTTTAAACCATGCCTCGTATCCTTGCCCACAGAGCATGGGAAGAATACTAATGGGTCCAGGAAATTGA 1755 0.4507 MDAAAEPGPSSELRLNGASEDPNRSGSGQNLTARYKLIAPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVESSPTTGSLRKLQQTVHGSKASAASATFAVTTSCFSTNTVDDRKSSFFEFKPLNRLNMVPADFNNRAIKQSTQVEGLGKAQSFVSSPLVESEIAVPANELSLSSPVQMVSSCPSASVDVDLDDVNHKGNTATGLQASHVDVRGSGLSVATEKTSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSCRYSTGTIMSIQVERSDKASSLAGLDDKAPSMYGQLSHAAEPNSASEPSPVATNGDGLEGVGFVSNRIGDDADDDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAVAAAGQTRIKLEESDTISLDLGMGISSAAEHRSNAQGKIMHSEFGNTQTHTSNSNFKFVHTTSAPVYFGVLNNSSNTYGSRDNRSDGPALNHASYPCPQSMGRILMGPGN* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03707 584 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 146 505 IPR044810 GO:0003700
Phac8g03707 584 Pfam WRKY DNA -binding domain 229 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03707 584 Pfam WRKY DNA -binding domain 405 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03707 584 Gene3D WRKY domain 219 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03707 584 Gene3D WRKY domain 389 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03707 584 SUPERFAMILY WRKY DNA-binding domain 396 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03707 584 SMART WRKY_cls 404 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03707 584 SMART WRKY_cls 228 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03707 584 FunFam WRKY transcription factor 33 391 457 - -
Phac8g03707 584 FunFam WRKY transcription factor 218 288 - -
Phac8g03707 584 ProSiteProfiles WRKY domain profile. 399 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03707 584 MobiDBLite consensus disorder prediction 552 584 - -
Phac8g03707 584 ProSiteProfiles WRKY domain profile. 223 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03707 584 MobiDBLite consensus disorder prediction 16 30 - -
Phac8g03707 584 SUPERFAMILY WRKY DNA-binding domain 224 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03707 584 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03707 Phac-Chr8 43536306 43542421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03707 38 582 WRKY Transcription Factor Family AT4G26640 55.072 0.0 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g03707 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03707 - - gmx:100816583 1032.71