Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03700 ATGAAGAGACATGTCTTTATCCAATGCATAAATAGAGAAGCATGCAGCACTAGCACGATTCATTTTGACAACAGAGGAAGAAGCAAACAGGGACGACCACAAAAAATGCAGAACACAAGAGGTTTTTCTATGTTGATGCTATTTTTCTTTGCTACCCTTTTCTTTATCATAGAATGTACAAGAGGTGAGTTATCAGAATCTGAGTCTTTCTTCAATTTCCTAAGGGCACTTGATCCCCAAAACGTGCTTAATAACACTACCTTAGTTGGATCACCATCACATTTGTGCTTGGCCAAGTTGAATGGTGTAAGATGTGACTCAAATGCTACCAATATTGTGCACATAAGGCTTGAGAACATGAACCTTAGTGGCACAATTGATGCAGATTCCCTATGCAGGCTCCAAAAGTTAAGAGTGTTGAGCTTGGCCAACAACAACATTAGAGGAACCATTCCACCTTCAATTTTGCATTGTACAAGGTTGACACATTTAAACTTAACCAGCAACCAATTGAGTGGGAGGTTCCCAAAATCCTTAACAAAATTGAAACATTTAAGGAACTTAGACATCTCCAATAACAAGTTTTCTGGTATGATTCCTAGTAAACAACAATATAGGCAACTATCTACTTATTATGTGACACCAAGTAATAGGTTGGAAAACAATAGTACCACAGAGGGGCTAAAAGAAAGTGACACAAACACAATGCAGCCACTGACACCAGATAATTTATCAGACACTGCTTCTGATAATGGCAATGGTTCAAGGAATTGGAAGACTGGAACTTTGGTGGTGTTACTCTTGGGCACTGTGGTTCTTGTGTCATCGTTCTACTTTATGGTAAAGAAGTCATCAAAGTTGAATGAAGGGAGAGAGGTAGTTAAAGAGAATCATGATGTGTTAAAGGCTCCTCCTAAAGAAGTTCAAGAGGTGAACCTAAAGGAAGGAGATTCTGAGCTTGTTTTCTTTGTTGAAGATCGTGAAAGGTTCACACTGGAGGATCTGCTTCGAGCCACTGCTGACTTGAGGAGTGAAGGCTTTTGCAGCAGCCTTTACAAGGTGAAACTGGAGAACAATAATCACTATGCAGTCAAAAGACTGAAGAATTTGCAGGTTTCCTTGGAAGAATTTGGTGAAACATTGAGGAAGATTAGTACCTTGAAGCATCAAAATATTCTCCCCCTTGTTGGTTATCGTTCCACCAGTGAAGAAAAATTCATCATTTACAAGTATCAGAACAATGGAAGCCTACTTAATCTGCTAAACGATTATTTAGCAGGTAGAAAAGATTTCCCATGGAAACTGCGTTTGAATATAGCATGTGGAATTGCAAGGGGCTTAGCCTTCATATATAGGAAGTTAGATGAGAAGGAGGAGGTGATTCCTCATGGAAATCTGAAGCCATCAAACATCCTTCTAGATGAGAACAATGAGCCACTAATAAGTGAGCATGGTTTATCAAAATTCATGGACCCAAATAGAGGTTTTCTCTTTTCTTCTCAAGGATACACAGCTCCTGAAAAGAGCCTCACAGAAAAGGGTGATGTATACAGCTTTGGAGTGATTCTCCTTGTTCTGCTAACAGGAAAAAGCATAGAAGTTAGCAGAATAGACCTTGCTAGATGGGTGAGGTCCATGGTGACGGAGGAATGGACAGGAGAAGTGTTTGACAAGGAAGTTAGGGAGAATGAGCATCAATGGGCATTTCCTCTTCTGAACATAGCCCTCTTGTGTGTCTCACGTTTCCAAGAAAATAGGCCAACCACTATGGATATTCTGCAGAAGATAGAGGAGGTCATGGATCAGCATGAACAATATCAGGAACGTTTTGCTTCCAAATGCTGTTCCAATGGATCCAACCGTGATGAGTGTTGTTCACTTCACAAGATCATACCTGAAACATGGGATTCTCCAGGATCAAATTATTGA 1929 0.4007 MKRHVFIQCINREACSTSTIHFDNRGRSKQGRPQKMQNTRGFSMLMLFFFATLFFIIECTRGELSESESFFNFLRALDPQNVLNNTTLVGSPSHLCLAKLNGVRCDSNATNIVHIRLENMNLSGTIDADSLCRLQKLRVLSLANNNIRGTIPPSILHCTRLTHLNLTSNQLSGRFPKSLTKLKHLRNLDISNNKFSGMIPSKQQYRQLSTYYVTPSNRLENNSTTEGLKESDTNTMQPLTPDNLSDTASDNGNGSRNWKTGTLVVLLLGTVVLVSSFYFMVKKSSKLNEGREVVKENHDVLKAPPKEVQEVNLKEGDSELVFFVEDRERFTLEDLLRATADLRSEGFCSSLYKVKLENNNHYAVKRLKNLQVSLEEFGETLRKISTLKHQNILPLVGYRSTSEEKFIIYKYQNNGSLLNLLNDYLAGRKDFPWKLRLNIACGIARGLAFIYRKLDEKEEVIPHGNLKPSNILLDENNEPLISEHGLSKFMDPNRGFLFSSQGYTAPEKSLTEKGDVYSFGVILLVLLTGKSIEVSRIDLARWVRSMVTEEWTGEVFDKEVRENEHQWAFPLLNIALLCVSRFQENRPTTMDILQKIEEVMDQHEQYQERFASKCCSNGSNRDECCSLHKIIPETWDSPGSNY* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03700 642 Pfam Protein kinase domain 346 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03700 642 Gene3D Ribonuclease Inhibitor 66 237 IPR032675 -
Phac8g03700 642 ProSiteProfiles Protein kinase domain profile. 337 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03700 642 MobiDBLite consensus disorder prediction 217 253 - -
Phac8g03700 642 Gene3D Phosphorylase Kinase; domain 1 305 411 - -
Phac8g03700 642 SUPERFAMILY L domain-like 93 202 - -
Phac8g03700 642 Pfam Leucine rich repeat 136 195 IPR001611 GO:0005515
Phac8g03700 642 Gene3D Transferase(Phosphotransferase) domain 1 413 621 - -
Phac8g03700 642 SUPERFAMILY Protein kinase-like (PK-like) 331 596 IPR011009 -
Phac8g03700 642 PANTHER OS05G0588300 PROTEIN 44 605 - -
Phac8g03700 642 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 128 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03700 Phac-Chr8 43513383 43516714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03700 81 599 Receptor kinase-like Gene Family AT5G53320 31.942 9.24e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac8g03700 Pkinase 2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03700 - - vra:106763201 1045.42