Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03678 ATGGCATCTTCTTCAAACTCATGGATGAAGGAATATAATGAAGCACTGAAACTTGCTGATGATATCAGTGGTATGATTTCCGAGCAGAGTTCATTTCCTGCATCTGGACCAGAAATCCAGCGTCATTCAACTTCTATAAGGAGGAAGATTACTATATTATGTACCCGGGTTGATAGCTTGCAATCTCTATTGTCCAATTTTCCTGGAAAGCAGCCCATATCTGAGAAGGAGATGAATCGTCGCAAGGACATGCTCGCAAGTTTGAGATCAAGAGTTAATCAAATGGCTTCCACATTGAACATGTCAAACTTTTCAAATAGAGATAGTTTGCTTGGACCAGAAGGAAAACCAGATGCAATGGCCAGAACTGTTGGCATGGACAACAATGGACTTGTTGGATTTCAACGGCAAATAATGAAAGAACAAGACGAGGGCCTTGAGCAATTGGAAGAGACTATAGCAAGCACAAAACATATTGCTTTGGCAGTGAATGAAGAGCTGGGTCTACACACCAGACTCATTGATGGCTTGGACCAGCATGTAGATGTCACAGATTCTCGCCTTAAGAGAGTGCAGAAGAACTTAGCAGTTTTAAATAAGCGAACCAAGGGTGGTTGTTCCTGCCTGTGCATGCTTTTATCAGTGGTTGGTATAGTGCTTTTAGTTATTGTGATTTGGCTATTGGTCAAATATTTGTGA 699 0.4134 MASSSNSWMKEYNEALKLADDISGMISEQSSFPASGPEIQRHSTSIRRKITILCTRVDSLQSLLSNFPGKQPISEKEMNRRKDMLASLRSRVNQMASTLNMSNFSNRDSLLGPEGKPDAMARTVGMDNNGLVGFQRQIMKEQDEGLEQLEETIASTKHIALAVNEELGLHTRLIDGLDQHVDVTDSRLKRVQKNLAVLNKRTKGGCSCLCMLLSVVGIVLLVIVIWLLVKYL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03678 232 CDD SNARE_Qc 139 196 - -
Phac8g03678 232 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 136 198 IPR000727 -
Phac8g03678 232 PANTHER SYNTAXIN 43 220 IPR045242 -
Phac8g03678 232 SUPERFAMILY t-snare proteins 13 158 IPR010989 GO:0016020|GO:0016192
Phac8g03678 232 SUPERFAMILY SNARE fusion complex 127 197 - -
Phac8g03678 232 Gene3D - 138 200 - -
Phac8g03678 232 Coils Coil 146 166 - -
Phac8g03678 232 Pfam SNARE domain 173 224 IPR000727 -
Phac8g03678 232 FunFam syntaxin-51 isoform X2 138 200 - -
Phac8g03678 232 SMART tSNARE_6 131 198 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03678 Phac-Chr8 43371888 43375021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03678 1 232 SNARE and Associated Proteins AT1G16240 69.528 1.82e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03678 K08503 - gmx:100782666 370.933