Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03656 ATGGAATTGTTTTTTAGAATGATGAGTTTTCTTCTAATCTTGTTCATTAGTTGTTTCTTTTGTCTTGGTGAAGCCACAGACTGTGGTGGGAAGAATGTTGCACAAACGATCATTGTTGGGAAACTAGGCAAAGCAGCATTTAGAACAGTTCAAGAGGCCATTGATTCTGTAAAACCTAACAATGATCAATGGGTCAAGATTCATATACAAGCAGGCTTATACATAGAAAGTGTTCTTATTCCCCAAGACAAACCTTGCATAATTTTAGAAGGAGAAGGCAGTGCAAAAACAACCATTAGTCATTGGGATCACCAGTCGATAAACAATAATGCTACGTTCACTTCTTTACCACCTAATATTATTGCAAGTGGCATTACTTTCAAGAACTCATATAATGTGGCTACCAGAAGATATGAATCTTACAATGAGGGAAGCAAAATTGAACCTGCAAATGCAGCAAAACTATTTGGAGATAAATATTTCTTCTATAAGTGTAGTTTTGTAGGTTATCAAGATACTTTATGTGATCATTTGGGACGCCATTTCTTCAAAGATTGTTACATTCAAGGTGAAGTTGACTTTATATATGGTGATGGACAATCTTATTATGGGAATTGTTCAATCAATGTTGTAGGGAGATTTCCAAAGGTAGCAGGGTTTGTCACAGCTCAGGGACGAAATTCATCAGATGATCCTAGTGGGTTTGTATTTGAAGGAGGCTCTATTACAGGAAATGGTAAAGTGCACTTAGGAAGAGCATGGCGACCCTACGCTAGGGTCATATTTCATGAAACATATTTTTCTTCCATTATAACTCCACATGGATGGGCTGCATGGAGACCCACTGACAATGAGAGTACGACCACTTTTTCTGAAGTTGACTGTAGAGGACCAGGAGCCAACACTTCAAAGCGTGTTTCGTGGATGAAAAAATTAAATTCTTCAGATTTGAAAGAATTTTCTTTTGCATCTTTCATCAACAATGATGGATGGTTTGACAACTTACCAACAATACTTGGTTGA 1023 0.3724 MELFFRMMSFLLILFISCFFCLGEATDCGGKNVAQTIIVGKLGKAAFRTVQEAIDSVKPNNDQWVKIHIQAGLYIESVLIPQDKPCIILEGEGSAKTTISHWDHQSINNNATFTSLPPNIIASGITFKNSYNVATRRYESYNEGSKIEPANAAKLFGDKYFFYKCSFVGYQDTLCDHLGRHFFKDCYIQGEVDFIYGDGQSYYGNCSINVVGRFPKVAGFVTAQGRNSSDDPSGFVFEGGSITGNGKVHLGRAWRPYARVIFHETYFSSIITPHGWAAWRPTDNESTTTFSEVDCRGPGANTSKRVSWMKKLNSSDLKEFSFASFINNDGWFDNLPTILG* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03656 340 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Phac8g03656 340 SUPERFAMILY Pectin lyase-like 33 335 IPR011050 -
Phac8g03656 340 Gene3D - 30 338 IPR012334 -
Phac8g03656 340 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 30 333 - -
Phac8g03656 340 FunFam Pectinesterase 31 336 - -
Phac8g03656 340 Pfam Pectinesterase 37 328 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03656 Phac-Chr8 43213352 43216327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03656 9 285 Carbohydrate Esterase AT2G19150 44.484 1.55e-75 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03656 - - var:108336510 514.998