Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03655 ATGGAAATGTTTTCTGGAACGATGAGTTTTCTTCTAATCTTGTTCTTCAGTTGTTTCTTTTGTCTTGGTAAGGCCACAGACTGTGGTGGGAAGAGTGTTGCACAAACGATCGTTGTTGATCAACAAGGCAAAGCAGCATTCAGAACAGTTCAAGACGCCATTGATTCTAACTCATATAATGTGGCGAATAAAATATATGAATCGAAAGATGTAGGAAGTGAACCAATCGAACCAGCAAATGCAGCAAGAATATATGGAGACAAATCTTTCTTCTATAATTGTAGTTTTGTAGGTTACCAAGACACTTTGTTTGATGCATATGGACGTCATTACTATAAAGATTGTCACATTCAAGGTGAAATCGATTTCATATTTGGTTCTGCACAATCTTATTATGAGAATTGTTGGATGGATGTTGTGGGGAGAGATCCAAATTTACCAGGGTTTGTTACAGCTCAGGGACGAAGTTCATCAGATGAACCTGGTGGTTTTGTATTTGAAGGAGGTTCAATTAGAGGAAATGCCATAGACTGTGGTGGAAATAATGTTACACAAACAATCATTGTTGGGAAACAAGGCGAAGCAGCATTTAGAACAGTTCAAGAGGCCATTGATTCTGTAAAAACTAACAATGATCAATGGGTCAAGATTCATATACAATCAGGTTTATACATAGAAAGGGTTACTATTCCCACAGAAAAGCCATGTATAATCTTAGAAGGAGAGGGTAATTCGACAACAACCATTAGTTACTCAGACCACCGATCAATAAACAATAACTCTACGTTTACTTCTTTATCATCCAATGTGGTTGCAAGTGGCATTACTTTCAAGAACTCGTATAATGTGGACATTGAAACATATAAATCTTACGACGTGGGAAGCCGAATCGAACCGGCAAATGCAGCAAGACTCCATGGAGATAAATATTTCTTCTATAATTGTAGTTTTGTAGGTTATCAAGACACTTTGTATGATCAATATGGACGTCACTATTTCAAAGATTGTTACATTCAAGGTGAAGTGGACTTCATATATGGTAGTGGACAATCTTACTATGAGAATTGCTGGATCGATGTTGTGGGTAGATCTCCAAAGCTAGCAGGCTTTGTCACAGCTCAAGGACGAAGTTCACCAGATGATCCAGATGGTTTTGTATTTGAAGGAGGTTTTCTTATAGGGAATGGTAAAGTGAACTTAGGAAGAGCATGGAGTCCTTATTCAAGAGTCATATTTCATAAAACATATTTTTCTTCCATTGTAACTCCCCAAGGATGGAATGCTTGGCATTATGTAGGCAATGAGAATGGACTCACTTATGCAGAAGTTGATTGTGAAGGACCAGGAGCCGATACTTCAAAGCGTGTTTCTTGGTTGAAGAAACTAAATAATTCAGAAATGGAAGCATTTTCTTTAACATCTTTTATCAATAATGATGGATGGATTGATAACTTACCAAAAATATCATCATAA 1473 0.3707 MEMFSGTMSFLLILFFSCFFCLGKATDCGGKSVAQTIVVDQQGKAAFRTVQDAIDSNSYNVANKIYESKDVGSEPIEPANAARIYGDKSFFYNCSFVGYQDTLFDAYGRHYYKDCHIQGEIDFIFGSAQSYYENCWMDVVGRDPNLPGFVTAQGRSSSDEPGGFVFEGGSIRGNAIDCGGNNVTQTIIVGKQGEAAFRTVQEAIDSVKTNNDQWVKIHIQSGLYIERVTIPTEKPCIILEGEGNSTTTISYSDHRSINNNSTFTSLSSNVVASGITFKNSYNVDIETYKSYDVGSRIEPANAARLHGDKYFFYNCSFVGYQDTLYDQYGRHYFKDCYIQGEVDFIYGSGQSYYENCWIDVVGRSPKLAGFVTAQGRSSPDDPDGFVFEGGFLIGNGKVNLGRAWSPYSRVIFHKTYFSSIVTPQGWNAWHYVGNENGLTYAEVDCEGPGADTSKRVSWLKKLNNSEMEAFSLTSFINNDGWIDNLPKISS* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03655 490 Gene3D - 180 487 IPR012334 -
Phac8g03655 490 SUPERFAMILY Pectin lyase-like 184 484 IPR011050 -
Phac8g03655 490 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 182 483 - -
Phac8g03655 490 Gene3D - 57 179 IPR012334 -
Phac8g03655 490 Pfam Pectinesterase 187 478 IPR000070 GO:0030599|GO:0042545
Phac8g03655 490 Pfam Pectinesterase 36 174 IPR000070 GO:0030599|GO:0042545
Phac8g03655 490 SUPERFAMILY Pectin lyase-like 33 175 IPR011050 -
Phac8g03655 490 FunFam Pectinesterase 181 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03655 Phac-Chr8 43205646 43211976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03655 177 435 Carbohydrate Esterase AT2G19150 46.565 1.10e-74 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03655 - - var:108336510 590.497