Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03647 ATGCGGAAGGGAAGAGGAGGGGCCGCGTCGGTCGTCACGGCGGCGGCTGCGGCGGCCAACGGATCCCTTTTAAAGGAGCCTCGGTACCGGGGCGTCAGAAAGAGACCGTGGGGGAGGTTTGCGGCGGAGATCAGAGACCCGTTGAAGAAAGCCAGGGTTTGGTTGGGAACCTTCGATTCTGCCGAGGAAGCTGCTCGAGCCTACGACGCCGCCGCTCGGTCTCTCCGAGGTCCCAAGGCCAAAACAAATTTTCCTCTCTCACACCCTTTTTGCTATCCGCACCCCACCACCAATCCTCTCTTCTACGCGGGTTTCCACGACAACAACCACCACAACAGCAGCCTTAACAACCCTCAGAGACCCACCTCGAGCGGGATGAGCAGCACCGTGGAGTCCTTCAGCGGACCCCGCCCTCCCGCCGCCGCCGCCACTTCCATGACGCCGTTTTTGACCACCACGCGGAGATACCCGCGCACTCCCCCTCTCGTCCCCGAAGACTGCCACAGCGACTGCGACTCTTCCTCGTCCGTCGTCGACGACGGCGACAACATCGTCTCTTCGTCGTTCCGCCCTCCCCTGTCCTTTGATCTCAACGCGCCGCCGTTCGACGATGCTTCCGCCGATGACGATCTCCGCTGCACCGCGCTCTGCCTGTGA 657 0.6271 MRKGRGGAASVVTAAAAAANGSLLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAARSLRGPKAKTNFPLSHPFCYPHPTTNPLFYAGFHDNNHHNSSLNNPQRPTSSGMSSTVESFSGPRPPAAAATSMTPFLTTTRRYPRTPPLVPEDCHSDCDSSSSVVDDGDNIVSSSFRPPLSFDLNAPPFDDASADDDLRCTALCL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03647 218 Gene3D AP2/ERF domain 28 87 IPR036955 GO:0003700|GO:0006355
Phac8g03647 218 CDD AP2 27 87 IPR001471 GO:0003700|GO:0006355
Phac8g03647 218 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 183 - -
Phac8g03647 218 Pfam AP2 domain 27 77 IPR001471 GO:0003700|GO:0006355
Phac8g03647 218 SUPERFAMILY DNA-binding domain 28 87 IPR016177 GO:0003677
Phac8g03647 218 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Phac8g03647 218 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Phac8g03647 218 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Phac8g03647 218 MobiDBLite consensus disorder prediction 111 183 - -
Phac8g03647 218 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Phac8g03647 218 MobiDBLite consensus disorder prediction 169 183 - -
Phac8g03647 218 MobiDBLite consensus disorder prediction 111 134 - -
Phac8g03647 218 FunFam Ethylene-responsive transcription factor 2 28 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03647 Phac-Chr8 43181194 43182973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03647 1 218 AP2-EREBP Transcription Factor Family AT1G50640 59.322 7.71e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac8g03647 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03647 K09286 - gmx:100803943 311.612