Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03640 ATGGAACCCTCTTCCAATCATGCCATTGCTCACCCTTCTTCACATCCACCCATGTCCTTCAGAGGGACACCACTTCTCATGGATGCCCTCCATTTCTTCCCTGAGAAGAGCAAAGAGATTGAAGATGATGATGACACTGATCACCATCAAACACTGGAGTATCATGTAGATACCAGTTTGGATCTGCTTACAAAGAATACCGGTGGCAACAGATCAATGGAGGAAAATGATGCATTGGAAACTATGGATGAAAAGAGCAGGTTTGTAGCTATGGTAAGTGAATTGCACCAAATGAATGCTGAAAATCGAAGATTAAGAGAGTTGGTCGATGAGATGAACAATAACTGCAATGCCCTACGCATGCAACTTATCGACATAACGCAGAAGCAGCATAACCAAGGGAACAATGGAGGGAGTGGAGAGAAAGAAGAGATGGTTCCAAGGCCATTTTTAGAGACAGAGGAAAAAGTGAGAGAAAGCAGAAGTGTGGTTGATTTGATGCATGAGTGTAAGGGTAGTGAGAAAGAGATTGAAGATAAGTTGGATTGTGGAAGGGAAAGCTCAAAAGCTAGAATGGAACAACTTTCTACCAAACTTCCTAAATTGGATCAAAATTCAGAAACCTTGTCAATGATCAAGAAAGCTCGTGTGTCAGTTCGAGCAAGATCAGACTCCACAATGATTGCAGATGGATGCCAATGGCGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCATGTCCAAGGGCTTATTATCGTTGCACAATGAGCACTGGTTGTCCAGTGCGTAAACAAGTACAAAGGTGTGCAGAAGATCGAAGTGTGCTGACGACAACATATGAAGGACAGCATAACCATGCACTCCCTCCCACAGCTCAGGCAATGGCCTCCACCACATCTGCAGCTGCTACAATGCTTCTTTCTGGATCAATGCCAAGCTCAGATGGCCAAATCAACCCAGCCATCTTAGAAACTGCTTCTCAAAACATGGCAACTCTCTCTGCCTCAGCCCCATTTCCCACCATCACTCTTGATCTCACTCAAAACCCTACCAATTCCTCACACCCACAAAGGGAACCACACAACCAACTCACCCTCCTCTCTCCCCTTTTGCCTCACAACTTCATCTCAGTTCCAAAATTATTTGGACACTCACTCTCTGATCAAACTAAGCTTGCTGCCTTGCATGACTCTCAGGGAAGAGACTCATCTCCATCATTTGCTAACTCGTTCAATGCAGCTACTGCTGCTATCACAGCAGACCCCAATTTCACTGCAGCTCTTGTTGCTGCTATAACATCAGTCATGGGGAGTTCACATAACAATTCAACTGGGGAAGACCAATGCAATAATAATGCATAG 1362 0.4464 MEPSSNHAIAHPSSHPPMSFRGTPLLMDALHFFPEKSKEIEDDDDTDHHQTLEYHVDTSLDLLTKNTGGNRSMEENDALETMDEKSRFVAMVSELHQMNAENRRLRELVDEMNNNCNALRMQLIDITQKQHNQGNNGGSGEKEEMVPRPFLETEEKVRESRSVVDLMHECKGSEKEIEDKLDCGRESSKARMEQLSTKLPKLDQNSETLSMIKKARVSVRARSDSTMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSTGCPVRKQVQRCAEDRSVLTTTYEGQHNHALPPTAQAMASTTSAAATMLLSGSMPSSDGQINPAILETASQNMATLSASAPFPTITLDLTQNPTNSSHPQREPHNQLTLLSPLLPHNFISVPKLFGHSLSDQTKLAALHDSQGRDSSPSFANSFNAATAAITADPNFTAALVAAITSVMGSSHNNSTGEDQCNNNA* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03640 453 Gene3D WRKY domain 213 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03640 453 MobiDBLite consensus disorder prediction 1 21 - -
Phac8g03640 453 FunFam probable WRKY transcription factor 31 213 290 - -
Phac8g03640 453 ProSiteProfiles WRKY domain profile. 223 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03640 453 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 72 443 IPR044810 GO:0003700
Phac8g03640 453 Coils Coil 95 129 - -
Phac8g03640 453 SMART WRKY_cls 228 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03640 453 Pfam WRKY DNA -binding domain 230 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03640 453 SUPERFAMILY WRKY DNA-binding domain 221 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03640 Phac-Chr8 43132506 43135894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03640 30 448 WRKY Transcription Factor Family AT1G62300 42.612 8.72e-91 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g03640 WRKY 2.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03640 - - vum:124848283 667.922