Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03592 ATGCCTTCAGCTCAAGATCCGTTCTATGTTGTGAAGGAGGAGATTCAAGAATCTATTGATAAGCTGCAATCTACTTTTCGCCAATGGGAAAAAGCTGCTGATGCTGGCGAGCGATCCAATCTTTCAAAGGAAGTTCTTACTAGCTGTGAAAGCATTGATTGGCAGGTAGATGAATTGGACAAAGCGATATCTGTGGCATCTAGAGATCCTTCTTTGTATGGCATTGATGAAGTGGAGCTTGAGAACCGGAGGAGGTGGACCAGTGAAGCTCGTAGCCAGGTGAGCACAGCAAAGAAAGCAGTGGAAGCAGGAAAACGCTCAAATATAACAAACAATGCTAGTCTAAATGGGATGCACAGGGAATTAATGAGGCTTCCTAATTCTCATCAAACTGCGTCTGGCCAATATGCTACCCAGGATAATGATGATTTCATGGAATCAGAATCGGACAGGCAGATGCTTCTTATAAAGTACTTATTTTCTCCCTCTCTCTCTCTCTCTCTTTCATATGACATTTAA 519 0.4277 MPSAQDPFYVVKEEIQESIDKLQSTFRQWEKAADAGERSNLSKEVLTSCESIDWQVDELDKAISVASRDPSLYGIDEVELENRRRWTSEARSQVSTAKKAVEAGKRSNITNNASLNGMHRELMRLPNSHQTASGQYATQDNDDFMESESDRQMLLIKYLFSPSLSLSLSYDI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03592 172 Gene3D - 2 104 - -
Phac8g03592 172 SUPERFAMILY t-snare proteins 5 101 IPR010989 GO:0016020|GO:0016192
Phac8g03592 172 CDD SNARE_NTD_AtSYP61-like 5 102 - -
Phac8g03592 172 Pfam Syntaxin 6, N-terminal 6 98 IPR015260 GO:0016020|GO:0048193
Phac8g03592 172 FunFam Syntaxin 10 3 104 - -
Phac8g03592 172 Coils Coil 12 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03592 Phac-Chr8 42955855 42959395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03592 53 157 SNARE and Associated Proteins AT1G28490 59.434 3.51e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03592 K08500 - gmx:100793612 268.47