Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03591 ATGCTGGCGAGCGATCCAATCTTTCAAAGGAAGTTCTTACTAGCTGTGAAAGCATTGATTGGCAGAAAGGTAGATGAATTGGACAAAGCGATATCTGTGGCATCTAGAGATCCTTCTTTGTATGGCATTGATGAAGTGGAGCTTGAGAACCGGAGGAGGTGGACCAGTGAAGCTCGTAGCCAGGTGAGCACAGCAAAGAAAGCAGTGGAAGCAGGAAAACGCTCAAATATAACAAACAATGCTAGTCTAAATGGGATGCACAGGGAATTAATGAGGCTTCCTAATTCTCATCAAACTGCGTCTGGCCAATATGCTACCCAGGATAATGATGATTTCATGGAATCAGAATCGGACAGGCAGATGCTTCTTATAAAGAGACAGGATGAGGAGTTGGACGAGCTTACTATAAGTATACAAAGAATTGGAGGTGTTGGACTTACTATACACGAAGAGCTCCTTGCACAGGAGAAGATTGTTGATGAACTGGGTAATGAGATGGACAGTACATCTAATCGTCTAGATTTTGTCCAAAAAAAAGTAGCAATGGTCATGAAAAAGGCTAGCGCAAAGGGCCAGATCATGATGATCCTGGGTTTGCTGGCTCTGTTCATTTTCCTCTTTATCTTGGTATTCTTCACCTAG 642 0.4299 MLASDPIFQRKFLLAVKALIGRKVDELDKAISVASRDPSLYGIDEVELENRRRWTSEARSQVSTAKKAVEAGKRSNITNNASLNGMHRELMRLPNSHQTASGQYATQDNDDFMESESDRQMLLIKRQDEELDELTISIQRIGGVGLTIHEELLAQEKIVDELGNEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMILGLLALFIFLFILVFFT* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03591 213 Pfam Syntaxin 6, N-terminal 22 66 IPR015260 GO:0016020|GO:0048193
Phac8g03591 213 SUPERFAMILY t-snare proteins 20 69 IPR010989 GO:0016020|GO:0016192
Phac8g03591 213 SUPERFAMILY SNARE fusion complex 119 183 - -
Phac8g03591 213 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 121 183 IPR000727 -
Phac8g03591 213 PANTHER SYNTAXIN 24 205 IPR045242 -
Phac8g03591 213 Pfam SNARE domain 158 209 IPR000727 -
Phac8g03591 213 Gene3D - 128 192 - -
Phac8g03591 213 Gene3D - 10 72 - -
Phac8g03591 213 CDD SNARE_Qc 124 181 - -
Phac8g03591 213 Coils Coil 159 179 - -
Phac8g03591 213 SMART tSNARE_6 116 183 IPR000727 -
Phac8g03591 213 FunFam syntaxin-61 isoform X1 124 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03591 Phac-Chr8 42955855 42959395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03591 14 213 SNARE and Associated Proteins AT1G28490 65.842 1.96e-89 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03591 K08500 - gmx:100793612 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g00585 6 10877608 10881950 Phac8g03591 8 42955855 42959395 PCT