Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03589 ATGGTTGAAGTGGGAATTTTTCAGATCACAGGTAACAGTTTCGACCCATTTGCTGAGGCTACAGATAGAGATGCCCCCGGGGCGAAGGAGTATGTGCATATCCGCATACAACAGAGGAATGGGAAGAAGAGTTTGACCACAGTGCAAGGGCTGAGGAAAGAGTTCAGCTATGAGAAGATCCTGAAAGACCTGAAGAAAGAGTTCTGCTGCAATGGCAATGTTGTGCATGACAAGGAGCTTGGAAAGATTATCCAACTTCAAGGTGATCAACGCAAGAACGTTTCTCACTTCCTCATTCAGGCTGGCCTTGTTAGGAAGGACCAGATCAAGATTCATGGTTTTTGA 345 0.458 MVEVGIFQITGNSFDPFAEATDRDAPGAKEYVHIRIQQRNGKKSLTTVQGLRKEFSYEKILKDLKKEFCCNGNVVHDKELGKIIQLQGDQRKNVSHFLIQAGLVRKDQIKIHGF* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03589 114 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 12 114 - -
Phac8g03589 114 CDD eIF1_SUI1 30 113 IPR005874 GO:0003743
Phac8g03589 114 Gene3D - 5 114 - -
Phac8g03589 114 Pfam Translation initiation factor SUI1 29 102 IPR001950 GO:0003743|GO:0006413
Phac8g03589 114 SUPERFAMILY eIF1-like 9 114 IPR036877 GO:0003743|GO:0006413
Phac8g03589 114 PIRSF Transl_init_SUI1_Euk 3 114 IPR005874 GO:0003743
Phac8g03589 114 ProSiteProfiles Translation initiation factor SUI1 family profile. 32 102 IPR001950 GO:0003743|GO:0006413
Phac8g03589 114 FunFam Eukaryotic translation initiation factor SUI1 4 114 - -
Phac8g03589 114 NCBIfam translation initiation factor SUI1 12 114 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03589 Phac-Chr8 42953601 42954781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03589 1 114 Eukaryotic Initiation Factors Gene Family AT5G54940 78.947 2.79e-62 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03589 K03113 - gmx:100499676 210.69