Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03578 ATGAGTGGAGTAGGGATTGATATTGGAAATGAGAATTGTGTGATTGCTGCAGTGAAGCAAGGTGGGGTTGATGTTTTGTTGAATGATGAATCCAAACGTGAAACCCCTGCTGTGGTTTGCTTTGGAGAGAAGCAAAGGTTTTTAGGGTCAGCTGGTGCTGCTTCTGCCATGATGCACCCCAAGTCCGCAATATCTCAAGTGAAGAGACTAATAGGCAGGAGATTTGCGGACCCTGACGTTCAAAATGAGTTGAAAATGCTCCCTGTTGAAACCTCTGAAAGTGCAGATGGTGGCATTCTGATACACTTGAAATACTTGAAAGAGAGTCATGCTTTTACCCCGGTTCAAATAGTAGCAATGCTCTTTGCGCACTTAAAGACCATAGCTGAAAAAGGTTTTGGGACCACCGTTTCTGACTGTGTTATTGGGGTTCCATCGTACTTCACCAACTTGCAGAGACAAGATTATCTCAACGCAGCAGCAATTGTTGGGTTGAAGCCTTTGAGGTTGATTCATGATTGCACTGCAACTGCTCTTAGTTATGGAGTTTACAAAACAGATTTTGCTAGTGAAGCTCCTGTTTATGTTGCATTTGTTGACATAGGTCATTGTGATACTCAGGTCTGTATTGCAGCATTTCAGGCTGATCAAATGAAGATACTGTCACATGCTTATGACATGAGCTTAGGGGGGAGAGACTTTGATGAGGTTCTGTTTAGTCATTTTGCTGCAAAATTTAATGAAGAGTACAACATTGAAGTGTATTCTAATGCCAGGGCATGTAGGAGGCTGCGTGTAGCATGTGAGAAGTTGAAGAAGGTTTTGAGTGCAAATCTAGAGGCTGATCTGATCATTGAGTGTTTGATGGATGAAAAAGATGTTAAAGGCTATATCAAGAGAGAAGAATTTGAGAATCTGGCCTCAGGACTATTGGAGAGAATTTGTGTTCCTTGCAACAAAGCATTGGCTGATGCAGCCTTGACAGTAGAAAATATTAATTCTGTTGAGGTAGTTGGTTCAGGTTCACGGATTCCAGCTATAACTAGAATATTAACATCTCTATTTCAGAGAGAGCTCAGCCGCAGACTTAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTCCAGTGTGCAATGCTGAGTCCTGTTTTCCGTGTCAAAAAATATGAGGTCCAGGATTCTATTCCTTTTTCCATTGGACTTTCATCTGATGAAAAGCCAATTCGTGCAGGATTGGATGGTGTACTCTTCCCAAAAGGCCAACCCATTCCAAGTGTTAAATTTCTCACATTTCAGTACAGTGATTTACTCCGTTTGGAAGCATTCTATGCCAATCCAGATGAATTACCTCCCGGGACATCTCCTAAAATTTGTTGCTTCACAATTGGTCCTTTCCATGGATCCCATGCAAGTAAGGCAAGAATTGAAGTTCAAGTTCAACTAAATTTGCATGGCATTATTGGTATTGAATCAGTTATGTTGGTTGAGGATCATGTGGATGATTCTCGTTCAAATTCTGAAACAATCAATATTGAACCTGTTTCTGAGACAATTGAAAATGCCTCAGAAGATAGTATCAATGAAAAGTGTGAAGCTTCTCATCATTCTGCTGATGGTACAAGAAAAGATAAAGCTAACAGAAGGCTTCATGTACCAGTGAGTGAAAACATTTATGGTGCAATGACCAAGGCCGAGATATTGGAAGCTCAAGAAAAAGAACTCCAGTTAGCCGATCAGGACAGAACTATTGAGCTAATCAAGGACAGGAAGAATCTGTTGGAGTCTTATATTTATGAAACAAGGAGTAAGCTCTTCAGCACATATCTAAGCTTTTCGAGTGAACATGAGAGGAAGGACATATCGAGGAGCCTTAAAGAGACTGAGGAATGGCTTTATGATGATGGTGGTGGTGATGAAACCGCAGATGCTTATTCTGCAAAACTAGCAGATCTAAAACAGATATAA 1965 0.4097 MSGVGIDIGNENCVIAAVKQGGVDVLLNDESKRETPAVVCFGEKQRFLGSAGAASAMMHPKSAISQVKRLIGRRFADPDVQNELKMLPVETSESADGGILIHLKYLKESHAFTPVQIVAMLFAHLKTIAEKGFGTTVSDCVIGVPSYFTNLQRQDYLNAAAIVGLKPLRLIHDCTATALSYGVYKTDFASEAPVYVAFVDIGHCDTQVCIAAFQADQMKILSHAYDMSLGGRDFDEVLFSHFAAKFNEEYNIEVYSNARACRRLRVACEKLKKVLSANLEADLIIECLMDEKDVKGYIKREEFENLASGLLERICVPCNKALADAALTVENINSVEVVGSGSRIPAITRILTSLFQRELSRRLNASECVARGCALQCAMLSPVFRVKKYEVQDSIPFSIGLSSDEKPIRAGLDGVLFPKGQPIPSVKFLTFQYSDLLRLEAFYANPDELPPGTSPKICCFTIGPFHGSHASKARIEVQVQLNLHGIIGIESVMLVEDHVDDSRSNSETINIEPVSETIENASEDSINEKCEASHHSADGTRKDKANRRLHVPVSENIYGAMTKAEILEAQEKELQLADQDRTIELIKDRKNLLESYIYETRSKLFSTYLSFSSEHERKDISRSLKETEEWLYDDGGGDETADAYSAKLADLKQI* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03578 654 PRINTS 70kDa heat shock protein signature 332 348 - -
Phac8g03578 654 PRINTS 70kDa heat shock protein signature 140 160 - -
Phac8g03578 654 PRINTS 70kDa heat shock protein signature 2 15 - -
Phac8g03578 654 PRINTS 70kDa heat shock protein signature 30 42 - -
Phac8g03578 654 PRINTS 70kDa heat shock protein signature 363 383 - -
Phac8g03578 654 PRINTS 70kDa heat shock protein signature 472 488 - -
Phac8g03578 654 FunFam Heat shock 70 kDa protein 4 102 194 - -
Phac8g03578 654 SUPERFAMILY Actin-like ATPase domain 192 381 IPR043129 -
Phac8g03578 654 MobiDBLite consensus disorder prediction 521 546 - -
Phac8g03578 654 Coils Coil 569 589 - -
Phac8g03578 654 Pfam Hsp70 protein 4 653 IPR013126 GO:0005524|GO:0140662
Phac8g03578 654 Gene3D Actin; Chain A, domain 4 230 313 - -
Phac8g03578 654 Gene3D - 5 374 - -
Phac8g03578 654 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 563 654 IPR029048 -
Phac8g03578 654 Gene3D - 38 113 - -
Phac8g03578 654 FunFam Heat shock 70 kDa protein 4 38 113 - -
Phac8g03578 654 Gene3D - 561 654 IPR029048 -
Phac8g03578 654 SUPERFAMILY Actin-like ATPase domain 3 185 IPR043129 -
Phac8g03578 654 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 519 IPR029047 -
Phac8g03578 654 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 594 IPR029047 -
Phac8g03578 654 PANTHER HSC70CB, ISOFORM G-RELATED 1 654 - -
Phac8g03578 654 FunFam Heat shock 70 kDa protein 4 230 313 - -
Phac8g03578 654 CDD HSPA4_like_NDB 2 381 - -
Phac8g03578 654 Gene3D - 186 360 - -
Phac8g03578 654 FunFam Heat shock 70 kDa protein 4 1 73 - -
Phac8g03578 654 MobiDBLite consensus disorder prediction 522 546 - -
Phac8g03578 654 FunFam Heat shock 70 kDa protein 4 561 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03578 Phac-Chr8 42923097 42928336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03578 4 435 Calmodulin-binding Proteins AT1G16030 33.181 2.29e-74 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03578 K09489 - gmx:100795914 1087.79