Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03564 ATGTTTGGTGTTTGTGCAGGTGGGTCAATAGTCGGAACAATTGCAGGAGGCATAAAGGGGCAGACCACAGAAACTGGTTTTCTTGATGGGGCTGGCAAAGGAGCAATCACAGGAGCCATTGCAGCATTGGAATTGATAAATTTTGATGCTGTTGATGAGCCATTGTCCAAGTTTGCCCTGTTGAGAAGTTTGTTAAATGGGAAAGTCTTTATGGAATGGATATGTCCAGCTGTGGCAAAACTCTATCAGTTGCATGTTACAATCAACACACTGGAAACAATTTACCAAGAAGTATCAGACATTTATGATATCAGGGGAGTAAGAGGGGTACCCCAGAATGTAATTATGAAGCTTCCTTTTCAGCCTTTCAACTCTAGCAAAATCTCCAAATCATACAACATGTCTTGCTGCTCAATTTGCTTCCAGGATTTTGAGGATGGAGAATTGGTGAGGGTACTTCCAAAATGTGGCCACCTTTTTCACCTAGAATGCATAGACAAATGGCTAGTCCAACAAGGATCATGCCCAATGTGCAGAACTTATGTTCCAGACCACATTCTTAAATAA 567 0.4162 MFGVCAGGSIVGTIAGGIKGQTTETGFLDGAGKGAITGAIAALELINFDAVDEPLSKFALLRSLLNGKVFMEWICPAVAKLYQLHVTINTLETIYQEVSDIYDIRGVRGVPQNVIMKLPFQPFNSSKISKSYNMSCCSICFQDFEDGELVRVLPKCGHLFHLECIDKWLVQQGSCPMCRTYVPDHILK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03564 188 CDD RING-H2_EL5-like 136 179 - -
Phac8g03564 188 SUPERFAMILY RING/U-box 136 183 - -
Phac8g03564 188 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 5 180 IPR044523 -
Phac8g03564 188 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Phac8g03564 188 SMART ring_2 137 178 IPR001841 -
Phac8g03564 188 Pfam Ring finger domain 137 179 IPR001841 -
Phac8g03564 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 185 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03564 Phac-Chr8 42882105 42884070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03564 8 182 C3H Transcription Factor Family AT5G66070 35.326 3.05e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03564 - K19041 gmx:100305612 337.421