Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03553 ATGAGTTTCTTTTCATGTTGCAAATCATCAGACAAGATCAACAAGAACTCATTCAGAAGGAGCAGCAAGGACTTCAATTATGAAAAAGCTATGCCATCATGTGGCCGCTTGTGTTTTAAACCTGATAACAGCAAGAGGAAATACATAGAACAAGAAATAGCAAAGATTGGAAAAGGGAATATTACCTCTCAGACTTTTTCTTATTACGAGCTATGTATTGCAACTCGGCACTTTAACTCTGAAAACATGATTGGTGAAGGAGGCTTTGGAAGGGTATACAAAGGACGCATTAAAAGCATACATCAGGTTGTTGCTGTGAAGAAACTTAACAGGAATGGATTCCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTCTTGCACCACCCTAACCTTGTCAATTTGGTAGGGTATTGTGCAGATGGTGAACAAAGGATTTTGGTATACGAGTACATGGTGAATGGTTCTTTAGAAGATCACCTTCTTGAACTACCTCCGAACAGAAAGGCTTTGGATTGGCATACTAGAATGAACATTGCAGCAGGTGCAGCTAAAGGACTTGAATACTTGCATGAGGTAGCAAATCCACCAGTGATATACCGTGATTTTAAATCATCAAACATACTATTAGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTAGCAAAGCTTGGTCCAACTGGTGATAAAACTCATGTATCCACCAGGGTGATGGGAACTTATGGCTATTGTGCACCTGAGTATGCCTCCACAGGTCAATTGACTACAAAATCTGATATATACAGCTTTGGAGTAGTATTTCTAGAGATGATCACAGGAAGAAGAGTAATTGATCAGTCAAGACCATCTCTAGAGCAAAACTTAGTCACTTGGGCACAACCACTGTTCAAAGACAGAAGGAAATTTGCATTAATGGCTGATCCATTGCTAAAAGGTAACTACCCTGCAAAGGGTCTACACCAAGCACTAGCAGTTGCAGCAATGTGTCTTCAGGAGGAAGCAAATACCAGACCTTTGATTAGTGATGTGGTTACAGCTCTTGATGTTTTAGCAAAGACGCAGGTGCAAGTGGGAAAACAGCAACGCACAGCAGAGGCTTTTTTGGAGGACAAAGAATGCAGTTGA 1140 0.4035 MSFFSCCKSSDKINKNSFRRSSKDFNYEKAMPSCGRLCFKPDNSKRKYIEQEIAKIGKGNITSQTFSYYELCIATRHFNSENMIGEGGFGRVYKGRIKSIHQVVAVKKLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGEQRILVYEYMVNGSLEDHLLELPPNRKALDWHTRMNIAAGAAKGLEYLHEVANPPVIYRDFKSSNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVFLEMITGRRVIDQSRPSLEQNLVTWAQPLFKDRRKFALMADPLLKGNYPAKGLHQALAVAAMCLQEEANTRPLISDVVTALDVLAKTQVQVGKQQRTAEAFLEDKECS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03553 379 CDD STKc_IRAK 84 353 - -
Phac8g03553 379 PANTHER OS07G0668900 PROTEIN 22 362 - -
Phac8g03553 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Phac8g03553 379 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Phac8g03553 379 SUPERFAMILY Protein kinase-like (PK-like) 61 352 IPR011009 -
Phac8g03553 379 Pfam Protein kinase domain 79 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03553 379 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Phac8g03553 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Phac8g03553 379 FunFam Serine/threonine-protein kinase PBS1 155 371 - -
Phac8g03553 379 Gene3D Transferase(Phosphotransferase) domain 1 155 377 - -
Phac8g03553 379 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03553 Phac-Chr8 42800259 42803630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03553 1 356 Glycoside Hydrolase AT3G07070 62.192 1.05e-159 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac8g03553 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03553 - - gmx:100798032 670.618