Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03552 ATGATTGGTGAAGGAGGCTTTGGAAGGGTATACAAAGGACGCATTAAAAGCATACATCAGGTTGTTGCTGTGAAGAAACTTAACAGGAATGGATTCCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTCTTGCACCACCCTAACCTTGTCAATTTGGTAGGGTATTGTGCAGATGGTGAACAAAGGATTTTGGTATACGAGTACATGGTGAATGGTTCTTTAGAAGATCACCTTCTTGAACTACCTCCGAACAGAAAGGCTTTGGATTGGCATACTAGAATGAACATTGCAGCAGGTGCAGCTAAAGGACTTGAATACTTGCATGAGGTAGCAAATCCACCAGTGATATACCGTGATTTTAAATCATCAAACATACTATTAGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTAGCAAAGCTTGGTCCAACTGGTGATAAAACTCATGTATCCACCAGGGTGATGGGAACTTATGGCTATTGTGCACCTGAGTATGCCTCCACAGGTCAATTGACTACAAAATCTGATATATACAGCTTTGGAGTAGTATTTCTAGAGATGATCACAGGAAGAAGAGTAATTGATCAGTCAAGACCATCTCTAGAGCAAAACTTAGTCACTTGGGCACAACCACTGTTCAAAGACAGAAGGAAATTTGCATTAATGGCTGATCCATTGCTAAAAGGTAACTACCCTGCAAAGGGTCTACACCAAGCACTAGCAGTTGCAGCAATGTGTCTTCAGGAGGAAGCAAATACCAGACCTTTGATTAGTGATGTGGTTACAGCTCTTGATGTTTTAGCAAAGACGCAGGTGCAAGTGGGAAAACAGCAACGCACAGCAGAGGCTTTTTTGGAGGACAAAGAATGCAGTTGA 894 0.4139 MIGEGGFGRVYKGRIKSIHQVVAVKKLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGEQRILVYEYMVNGSLEDHLLELPPNRKALDWHTRMNIAAGAAKGLEYLHEVANPPVIYRDFKSSNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVFLEMITGRRVIDQSRPSLEQNLVTWAQPLFKDRRKFALMADPLLKGNYPAKGLHQALAVAAMCLQEEANTRPLISDVVTALDVLAKTQVQVGKQQRTAEAFLEDKECS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03552 297 Gene3D Transferase(Phosphotransferase) domain 1 74 295 - -
Phac8g03552 297 ProSiteProfiles Protein kinase domain profile. 1 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03552 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Phac8g03552 297 Gene3D Phosphorylase Kinase; domain 1 2 73 - -
Phac8g03552 297 ProSitePatterns Protein kinases ATP-binding region signature. 2 26 IPR017441 GO:0005524
Phac8g03552 297 CDD STKc_IRAK 2 271 - -
Phac8g03552 297 PIRSF ILK 1 290 - -
Phac8g03552 297 FunFam Serine/threonine-protein kinase PBS1 73 289 - -
Phac8g03552 297 PANTHER OS07G0668900 PROTEIN 1 281 - -
Phac8g03552 297 SUPERFAMILY Protein kinase-like (PK-like) 1 270 IPR011009 -
Phac8g03552 297 Pfam Protein kinase domain 2 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03552 Phac-Chr8 42800259 42803630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03552 1 274 Glycoside Hydrolase AT3G07070 72.628 2.70e-150 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac8g03552 Pkinase 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03552 - - gmx:100797557 552.362