Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03529 ATGGAAACTAAGAAGCTTCAGCTTCGCTTCTCGCTCGGCCGCCAATCCTCCCTCGCGCCGGAGCGCGACGGTGCGGAGGACGTGTCGGAGGCGCTGGATCCGACGGTTCGGTTGATGTATCTGGCCAACGAAGGAGACTTGGTCGGGATTGAGGAGCTGTTGGACGCGGGGAGCGACGTCAATTTCACCGACATTGACGGCCGCACTGCTCTCCACGTCGCCGCCTGCCAGGGCCGCACCGACGTTGTTGACCTGCTGCTACGACGAGGAGCCGACGTTGATCCGCGAGACCGCTGGGGCAGCACCCCGCTAGCTGATGCAATGTACTACAAAAACCACGACATCGTGAAGCTTTTGGAGAAGCACGGTGCAAAACCTCCGATAACTCCCATGCATGTGGAGAATGCTCGAGAAGTCCCAGAGTATGAGATTGATCCTTCTGAACTTGATTTTACTAATAGTGTTTGCATAACAAAGGGAACTTTCCGGATTGCTTTATGGCGGGGAACTCAGGTTGCAGTCAAGACACTTGGAGAGGAAGTGTTCACAGATGATGATAAAGTAAAGGCATTTCATGATGAGCTTACATTACTTGAGAAAATAAGGCATCCAAATGTAGTTCAGTTTTTGGGTGCTGTAACCCAAAGTACCCCAATGATGATCGTCACAGAATATCTACCCCAGGGGGATCTTAACGCCTACATTAAGCGGAAAGGTGGATTAAAACCATTAACAGCTGTAAAATTTGCACTTGATATTGCTAGGGGTATGAACTATTTGCATGAACATAAACCAGAAGCCATTATACACCGAGATCTTGAGCCTTCGTATGTTTTATGCTCTCCTACCCTGTCTAGTTGA 861 0.4983 METKKLQLRFSLGRQSSLAPERDGAEDVSEALDPTVRLMYLANEGDLVGIEELLDAGSDVNFTDIDGRTALHVAACQGRTDVVDLLLRRGADVDPRDRWGSTPLADAMYYKNHDIVKLLEKHGAKPPITPMHVENAREVPEYEIDPSELDFTNSVCITKGTFRIALWRGTQVAVKTLGEEVFTDDDKVKAFHDELTLLEKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLNAYIKRKGGLKPLTAVKFALDIARGMNYLHEHKPEAIIHRDLEPSYVLCSPTLSS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03529 286 Pfam Ankyrin repeats (3 copies) 38 126 IPR002110 GO:0005515
Phac8g03529 286 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Phac8g03529 286 FunFam Integrin-linked protein kinase family 16 142 - -
Phac8g03529 286 SUPERFAMILY Ankyrin repeat 37 129 IPR036770 -
Phac8g03529 286 Gene3D - 2 142 IPR036770 -
Phac8g03529 286 Gene3D Transferase(Phosphotransferase) domain 1 225 285 - -
Phac8g03529 286 Gene3D Phosphorylase Kinase; domain 1 144 224 - -
Phac8g03529 286 PIRSF ILK 2 284 - -
Phac8g03529 286 ProSiteProfiles Protein kinase domain profile. 151 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03529 286 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Phac8g03529 286 FunFam serine/threonine-protein kinase STY46-like 144 227 - -
Phac8g03529 286 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 117 280 - -
Phac8g03529 286 Pfam Protein tyrosine and serine/threonine kinase 168 279 IPR001245 GO:0004672|GO:0006468
Phac8g03529 286 PRINTS Ankyrin repeat signature 115 129 IPR002110 GO:0005515
Phac8g03529 286 PRINTS Ankyrin repeat signature 67 82 IPR002110 GO:0005515
Phac8g03529 286 SUPERFAMILY Protein kinase-like (PK-like) 156 281 IPR011009 -
Phac8g03529 286 SMART ANK_2a 99 128 IPR002110 GO:0005515
Phac8g03529 286 SMART ANK_2a 66 95 IPR002110 GO:0005515
Phac8g03529 286 SMART ANK_2a 32 62 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03529 Phac-Chr8 42686856 42690840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03529 9 279 MAP Kinase Kinase Kinase AT3G58760 70.877 6.09e-145 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Phac8g03529 PK_Tyr_Ser-Thr 3.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03529 - - gmx:100795964 512.301