Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03499 ATGGTCATGAGCACCTACTTAGAGGGCACCACATCGCGACCAATTGCACCCACCATGGAGGATGAAGATTTGGAGAACAACAATGAGAAGACAGCAATGGTGAGAAAGAATTCAGAAGTAGTTGTGCTGACAAGTAGTAATGGCCGTTTACAAATGCTTAGGAATTTCATGACCAATTTGCAAGTGGTGTTTCTTGGTACTAAGCTTCTTCTGCTTTTTCCAGCAGTCCCTTTGGCTGTTGTTGCAACTTTCTATGGCTTTGGAAGGCCTTGGATTTTTGCTTTCAGCCTCCTTGGACTTGCTCCTCTAGCTGAACGTGTCAGCTTCCTGACTGAGCAAATTGCATATTATACTGGTCCAACAGTTGGAGGGCTTCTTAATGCAACCTGTGGAAATGCAACCGAGATGATCATAGCATTATTAGCACTTCATCAGAACAAAGTAAATGTTGTGAAGTTGTCCTTGCTTGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGAAGCTCACTCCTCTGTGGTGGTTTAGCCAATCTCAAGAGAGAGCAAAGATATGACAGAAAACAGGCTGATGTAAACTCACTGCTTCTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTGCTGTTCAGATGCGCCTTAGGAGGGCCCCACCATTCCATAGCTGCTAACACTCTTCAGTTGTCCAGAGCAAGCAGTGTTGTTATGCTTCTAGCATACCTTGCTTACATCTTCTTCCAGTTAAAAACTCACAGAAAATTGTTTGATGCACAAGGGGAGGAGGAAGATGAAGAGAAGGCAGTGATAGGATTTTGGAGTGCATTTACATGGTTGGTGGGTATGACATTGGTCATATCTTTGCTTTCTGAATATGTAGTGGGAACAATTGAGGCTGCTTCAGAGTCTTGGGGCATTTCTGTGAGCTTCATTAGCATAATTTTGCTACCAATTGTTGGAAATGCAGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATATCTTTGGGAGTGGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGGTTGTTGCATGGATAATGGGTATAAGAATGGATTTGGACTTCAGTCTTCTTGAAACTGGATGTCTTGCTTTTACCATCATAGTTACGGCCTTCACTTTACAGGATGGAACTTCACACTACATGAAGGGAGTGGTTCTTACTCTATGTTACATTGTGATTGGTGCATGCTTTTTTGTTCTCAAAACTCCTCTAACTGGCCAAAATTCCATGGCCAACTTTGGAGATAACTAA 1308 0.4266 MVMSTYLEGTTSRPIAPTMEDEDLENNNEKTAMVRKNSEVVVLTSSNGRLQMLRNFMTNLQVVFLGTKLLLLFPAVPLAVVATFYGFGRPWIFAFSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALHQNKVNVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFRCALGGPHHSIAANTLQLSRASSVVMLLAYLAYIFFQLKTHRKLFDAQGEEEDEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASESWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFSLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLTLCYIVIGACFFVLKTPLTGQNSMANFGDN* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03499 435 Pfam Sodium/calcium exchanger protein 91 248 IPR004837 GO:0016020|GO:0055085
Phac8g03499 435 Pfam Sodium/calcium exchanger protein 274 412 IPR004837 GO:0016020|GO:0055085
Phac8g03499 435 NCBIfam calcium/proton exchanger 55 417 - -
Phac8g03499 435 NCBIfam calcium/proton exchanger 74 417 IPR004798 GO:0006816|GO:0015369
Phac8g03499 435 Gene3D - 120 417 IPR044880 -
Phac8g03499 435 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 22 420 IPR004713 GO:0006812|GO:0008324|GO:0016020
Phac8g03499 435 FunFam Vacuolar cation/proton exchanger 120 263 - -
Phac8g03499 435 FunFam Vacuolar cation/proton exchanger 264 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03499 Phac-Chr8 42527500 42531228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03499 27 422 Antiporters AT2G38170 66.914 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03499 K07300 - gmx:100802344 690.263