Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03491 ATGTGCGGTGTTTCCAAGGGGAAACCTTCTCAAATTGGTTTGGTGATGGAGGAAGAGTGTGGAAAAGAAGGGATGCATCATAGAATTTCTGCTTTGCTTGAGTTTTCTGCTGCAGATGATCTAATTGGCTTCAAAGAGGCGGTTGAAAAGGAGGGTCTTGATGTTGATGGGGTGGGGTTGTGGTATGGAAGGCGTGCTGGCTCAAAGAGAATAAGTTATGAAGAGAGGACTGCTCTCATGGTTGCTTCTACGTTTGGAAGCCTTGATGTGTCAGCTTATATTCTTGGAACGGGTCGTGTTGATGTTAGCCGGGCCAGTAGGTCAGATGGGGCTACTGCTCTTCATTGTGCTGTTGCTGGGGGTTCTGCTGCTTCTGTTGAGATTGTCAAGCTTTTGCTTGATGCATCTGCTGATGTTAGTGCTGTTGATGCTGATGGTAACAGGCCAATTGACTTGATTGTTTCTGTGGCTAATTCTATTTTCAGTCCAAGGGCCAGGGTGCTACAGGCCCTCCTGGAGGGTACCTGTGATGCTGCTGATCAGACATGTTTCTCACTTCCACAAGTGATTGACCAAATTGAGGAACAAAGGCAAGAAACGACCACACCCCGTGTTTCCAAAGATTATCCCATTGATCTCTCCCTTCCAGACATAAAGAATGGGATATATGGCACTGATGAGTTTAGGATGTATACATTCAAAGTGAAGCCTTGTTCCAGGGCCTATTCTCATGACTGGACCGAGTGCCCCTTTGTTCATCCAGGGGAGAACGCAAGGCGACGTGATCCAAGGAAGTACCATTACAGCTGTGTCCCTTGTCCTGAGTTTCGCAAGGGATCTTGCAGCAAAGGGGATGCCTGTGAGTATGCTCATGGTATATTTGAGTGCTGGCTTCACCCTGCCCAGTACCGGACCAGGCTCTGCAAGGATGAGAGTGGATGCACAAGGAGAGTTTGCTTTTTTGCACACAAGGCGGAGGAGCTTCGTCCCCTGTATGCTTCTACAGGTTCTGCTATTCCTTCTCCAAGGTCCTATTCTGTTAGTGCTTCTGCATTGGAGATGGGTTCAGTTAGCCCAATTGCACTTGGTTCTCCATCAATCTTGATACCACCTGCCTCAAAACCACCTTTGACTCCATCTGGGGCATCTTCTCCGGTTAGTGGTTCCATTTGGTCTCAATCTAATGTTGCAGTCCCCACCCTGCAGCTGCCCAAAAGCAGATTGAAGGCTGCATCAGCTGCAAGAGACATTGATTTGGATTTTGAACTGCTTGGACTTGAAGCTCATAGGCGTAGACAACAGCTAATGATGGATGAGATGTCTGGTCTTTCCTCTCCCACCAACTGGAAAAATTCCATGCCTAATAGTCCATCTTTTCGTGTTTCTCTGAGTGATCACATTGGGGAGTTAAATAGGCTTTCAGGGGTGAAGCCTTCTAACCTTGAAGATACCTTTGGATCTCCTGAACCATCAATTTTGTCTAAATTCCATGGAATCTCACTTGATGTTGCAGGACCTCAGTTACAATCTCCAACTGGAATCCAAATGCGTTCGAACATGAACCAGCAGCTGGGAGGCTATTCATCGGGCCTTTCCATGTCAAACATGGTTGAATCGAGACCCTTCAGGGTTGATCCATCTGCTGAAGGAGCCTCAGTGGCTTTGAATCCAAGAGCTGCTGCCTTTGCAAAGCGTAGCCACAGCTTTATCGAGCGAAGCATGGTGAACCATCACTCTGAGCTTCCTTCTCCAAAGCTCTCTACCTTCTCTAACTGGGGCTCCCCTGATGGAAAACTGGATTGGGCCATAAATGGAGATGAGCTGAATAAACTGAGGAAATCTGCCTCCTTTGGATTTCGAAGCAGCAACAGTCCCATCACAGAGGCTTCAACCAAAATGGCAGCAAATGTTGATGATGAGCCAGACGTGTCTTGGGTTAACTCACTTGTCAAGGATGCTCCACCAGAATCTGGGGTCGAAGATCAGCCAAAACAATGCCATAATGGAACAGAAACAATTCCAGCGTGGATGGAGCAAATGTACTTGGATCAGGAGCAAATGGTGGCATGA 2070 0.4744 MCGVSKGKPSQIGLVMEEECGKEGMHHRISALLEFSAADDLIGFKEAVEKEGLDVDGVGLWYGRRAGSKRISYEERTALMVASTFGSLDVSAYILGTGRVDVSRASRSDGATALHCAVAGGSAASVEIVKLLLDASADVSAVDADGNRPIDLIVSVANSIFSPRARVLQALLEGTCDAADQTCFSLPQVIDQIEEQRQETTTPRVSKDYPIDLSLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSKGDACEYAHGIFECWLHPAQYRTRLCKDESGCTRRVCFFAHKAEELRPLYASTGSAIPSPRSYSVSASALEMGSVSPIALGSPSILIPPASKPPLTPSGASSPVSGSIWSQSNVAVPTLQLPKSRLKAASAARDIDLDFELLGLEAHRRRQQLMMDEMSGLSSPTNWKNSMPNSPSFRVSLSDHIGELNRLSGVKPSNLEDTFGSPEPSILSKFHGISLDVAGPQLQSPTGIQMRSNMNQQLGGYSSGLSMSNMVESRPFRVDPSAEGASVALNPRAAAFAKRSHSFIERSMVNHHSELPSPKLSTFSNWGSPDGKLDWAINGDELNKLRKSASFGFRSSNSPITEASTKMAANVDDEPDVSWVNSLVKDAPPESGVEDQPKQCHNGTETIPAWMEQMYLDQEQMVA* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03491 689 SMART ANK_2a 74 104 IPR002110 GO:0005515
Phac8g03491 689 SMART ANK_2a 109 141 IPR002110 GO:0005515
Phac8g03491 689 SUPERFAMILY Ankyrin repeat 71 158 IPR036770 -
Phac8g03491 689 ProSiteProfiles Ankyrin repeat region circular profile. 109 143 - -
Phac8g03491 689 ProSiteProfiles Ankyrin repeat profile. 109 144 IPR002110 GO:0005515
Phac8g03491 689 FunFam Zinc finger CCCH domain-containing protein 66 225 293 - -
Phac8g03491 689 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 272 292 IPR000571 GO:0046872
Phac8g03491 689 Gene3D - 268 330 - -
Phac8g03491 689 ProSiteProfiles Zinc finger C3H1-type profile. 272 294 IPR000571 GO:0046872
Phac8g03491 689 Pfam Ankyrin repeats (3 copies) 70 142 IPR002110 GO:0005515
Phac8g03491 689 PANTHER UNKEMPT FAMILY MEMBER 34 653 IPR045234 -
Phac8g03491 689 Gene3D - 31 178 IPR036770 -
Phac8g03491 689 SMART c3hfinal6 267 293 IPR000571 GO:0046872
Phac8g03491 689 SMART c3hfinal6 302 325 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03491 Phac-Chr8 42455578 42458897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03491 1 684 C2H2 Transcription Factor Family AT5G12850 38.603 8.62e-143 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac8g03491 Ank_2 1.2e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03491 - - gmx:100795085 1181.78