Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03481 ATGTCTCAGAATCATTCTCCAATGGATGTTGATGGTGAGAGGTGTTATCAGAGCACTAAACGGAGAAGAGGGGCGAGGAAAAAAAAGCTTCTTGTCAACGAGAGAGTGGAGGTAAAAAGTGTGGAAGAGGGTTTTCTGGGTTCATGGCACCCGGGGACGGTGGTCCGTTGCGAGAGGCAGAAGCGTTATGTCAAATATGACAATATTCTAGATGATGATGGATCAAAATACCTTGTGGATGTGGTGCGTGTTTCACCTGTTTTGGATGGTTATAGTTCTTCAGGTTGTAACTTTGAACATGGATTCATCAGACCACTGCCTCCTCCATTTGAGTTTGGGGAGAGGGACGTTTCATTTGGCCTCTGTGTTGATGTAAATTATCAAGAAAGCTGGTGGGAAGGTGTTATATTTGATCACTGTAATGGAATGGAGGAGAGGAGCGTGCTCTTCCCAGATTTGGGTGATGAAATGAAGGTAGGAACTCATCAATTGCGGATAACTCAGGAATGGGATGAAGCTACTGAGAATTGGGAGCCACGAGGGAAGTGGGTGTTCCTTGAAGTAGTTCAGGAGTGTGAAAAGGAATCCTTTGTTGCTGTTTCAGTGAAGCAAATATGGTATGATATAAGGACTAGAAAGGATTTTGACAATATAAAACATTGGACTTGTAATGATAAGGACTTGTGGAGAGCCCTTATAGTGGAGGTGATTAGTGACTACTATGTTCTCACACTAGAAGAAGTTTTCCCAGCTTTAAACCTTCCGGAGGATTTCTTGAAAGAAACACAAGAACTGAACTCAGTTGAACCTACTGACAACATTCAGTGTGATGCTGTACACACTAACGTATTTGGTTCTGACATTATTGTTTCTGATATCCCTATGGAAAATGGTGGCATGTCAAACTTGTTGGATAGCAATAAAAAAAGTGGTAGCATCATTTGCTTTCAAGAGGAATACGATAGGGATCCTTTGATGGATGGACCCTCAGAGAAGAAACTTATTTGGCTGGAGGAACCTGTATCTCCTGTTCAGAAGATCATGCCTGATGCTGGTGAAGTAAAGCCGGGTGCTAGCTGTTGTTCAAAAAAGAGAAAACGTAGACACTCAGTGTCCATTCGTTGGAAACCTATGGTAGTGGCCGAGGTTGAATTCTGTCCTGATGTTATTAACCAGTATTTACTTGGATGTGGTAGCAAGTCCATTAGGGAACTTTTGAAGACTAAAGTATGGAAGCATCTAGCATATCTTGGATGGAAAATTGAGTGGACAGAAGATAGACATACTCCTGGACGTGGACGCTACAGGTACAAGTCACCTGATGCACAGGACGAGAAGTTTTACACTTCAATTATTCAAGTTTTGACACATATGCAATTGGAGTCCAACATGAACACTATGCTGCCCCAAGTTGATCACAGTAGGATGGGTTCTGCAAATGACTCTAATCTTTCACTTCTGCTTTCAGACCAACCAAATGACCAGGATCTAGATGTTTTTCCTCCAAATGAGGGAAGTGTTGGGCATGTTGATAGCGATGATCTATCGCAAACCTTGTCCCAATTTCTTCAAAAAGAACCTGAATTGCATACTGCTTCACCAGCAAGTAGGTCAACTGAGAATAGAAACCCTAAACACTCCAGGAATTCAAAGGCCATCATGCCAAAGTGCCACATGAAAGGGTCACGTAGAGAATGTCTAAGATCAAGCAAAAGGGTGCTGTCTACCCCAAGTGTGTCACACCAACGACCTCAAAATGTTCTGTCTTGGTTAATAGATAGGGGCGTGCTGATGCTAAGATGTAAGGTCTATTACTGGGCAGAAGGAGGCAGTAACACTGATTTAGCTCAGGGGAGGATTACTTATGATGGAATTAAGTGTAGCTGTTGCCAGAAAATATATGGTATTCGGGGCTTTGTAAATCATGCTGGTGGAAGTGGTGACAGCAGGCCTTCTGCTTGCATATTTTTGAAGGATGGTAGATCACTCTTAGATTGCATGGTAAAAGTCATGCACGATAGTAGAACAAGGGAAGATATGAACAGACCATGCAATGATCTGTTTGGAGGAGAAAATGACGATATTTGTTCTGTCTGTCAATATGGTGGTGAACTTATTTTATGCGACAAATGTCCATCCGCATTTCATAGGACATGTCTTGGTTTGAATGATGTCCCTCATGGTGACTGGTTTTGCCCATCATGTTGTTGTGCGATTTGCAGCCAAATCAAAACAGAGGGGTCTGAGGATGTACCTTTTCTTACTTGCATTCAATGTGAACACAAATATCACGTTGGATGCTTGAAAAATAGAGAAAAAGATGAGTCAAGAAGATATATGGAAAATTGGTTGTGTGGAAAAGAGTGTGAACAGATATATGCAGGCCTTCAAAGTCTATTAGGAAAGCCACTTATTGTGGGTCCGAACAAGCTAACTTGGACACTGGAGAAGTTTAACAATTCTGAGAGTCCCGATGTTGGCAGTTCTCTGAATGACTTATTGGCAGAGAAATACAGCAAACTCAGTGTTGCACTTTCGGTGATGCATGAGTGTTTTGATCCCCTAAAGAACCCTCTCACTGGTAGAGATATCATTGATGATGTTATGTTCAACTCTAGGTCAGAGCTCAATCGATTGAATTTCCAGGGTTTCTACACTGTACTTCTCGAGCAAAATGAAGAACTGATTAGTGTAGCAACTATTAGGATTTTTGGAGACAAAGTAGCCGAGGTACCGCTTGTAGGTACCAGAATACAATATCGTCGACTTGGAATGTGTCGCATTTTAATGAATGAGCTTGAGAAGAACCTCATGCAACTGGGAGTGGAGAGACTAGTCTTGCCTGCTGTTCCTGCTGTGCTAGAAACTTGGACCAAATCTTTTGGCTTTGAACAGATGACAAATTTCGATAGGTCACAGTTCTTGGATTGTGCTTTCCTAGATTTTCAGGAAACCGTCATGTGCCAGAAGTTGTTGACAAGGATTCCATCTCCCCAGTCAGGTTTAACAAGAGAAACACAACGAAAACCACATGATGTTTTGAGTCTTAAATGTAGAATTGAATTTGACAAGTCGAGTTCAGCATCAGAAGTAGACCAACATGAAGAGATAGACAAAAGTAGGATGGATCAACAGGGGCTGGAGTGTGTCTCTCCTCTTCCAACTTCCTGA 3171 0.4204 MSQNHSPMDVDGERCYQSTKRRRGARKKKLLVNERVEVKSVEEGFLGSWHPGTVVRCERQKRYVKYDNILDDDGSKYLVDVVRVSPVLDGYSSSGCNFEHGFIRPLPPPFEFGERDVSFGLCVDVNYQESWWEGVIFDHCNGMEERSVLFPDLGDEMKVGTHQLRITQEWDEATENWEPRGKWVFLEVVQECEKESFVAVSVKQIWYDIRTRKDFDNIKHWTCNDKDLWRALIVEVISDYYVLTLEEVFPALNLPEDFLKETQELNSVEPTDNIQCDAVHTNVFGSDIIVSDIPMENGGMSNLLDSNKKSGSIICFQEEYDRDPLMDGPSEKKLIWLEEPVSPVQKIMPDAGEVKPGASCCSKKRKRRHSVSIRWKPMVVAEVEFCPDVINQYLLGCGSKSIRELLKTKVWKHLAYLGWKIEWTEDRHTPGRGRYRYKSPDAQDEKFYTSIIQVLTHMQLESNMNTMLPQVDHSRMGSANDSNLSLLLSDQPNDQDLDVFPPNEGSVGHVDSDDLSQTLSQFLQKEPELHTASPASRSTENRNPKHSRNSKAIMPKCHMKGSRRECLRSSKRVLSTPSVSHQRPQNVLSWLIDRGVLMLRCKVYYWAEGGSNTDLAQGRITYDGIKCSCCQKIYGIRGFVNHAGGSGDSRPSACIFLKDGRSLLDCMVKVMHDSRTREDMNRPCNDLFGGENDDICSVCQYGGELILCDKCPSAFHRTCLGLNDVPHGDWFCPSCCCAICSQIKTEGSEDVPFLTCIQCEHKYHVGCLKNREKDESRRYMENWLCGKECEQIYAGLQSLLGKPLIVGPNKLTWTLEKFNNSESPDVGSSLNDLLAEKYSKLSVALSVMHECFDPLKNPLTGRDIIDDVMFNSRSELNRLNFQGFYTVLLEQNEELISVATIRIFGDKVAEVPLVGTRIQYRRLGMCRILMNELEKNLMQLGVERLVLPAVPAVLETWTKSFGFEQMTNFDRSQFLDCAFLDFQETVMCQKLLTRIPSPQSGLTRETQRKPHDVLSLKCRIEFDKSSSASEVDQHEEIDKSRMDQQGLECVSPLPTS* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03481 1056 MobiDBLite consensus disorder prediction 1024 1056 - -
Phac8g03481 1056 SMART PHD_3 737 789 IPR001965 -
Phac8g03481 1056 SMART PHD_3 695 736 IPR001965 -
Phac8g03481 1056 MobiDBLite consensus disorder prediction 471 492 - -
Phac8g03481 1056 CDD NAT_SF 887 947 - -
Phac8g03481 1056 PANTHER PHD FINGER PROTEIN 12 397 1035 IPR042163 GO:0003714|GO:0045892
Phac8g03481 1056 MobiDBLite consensus disorder prediction 471 512 - -
Phac8g03481 1056 Pfam Agenet domain 34 108 IPR008395 -
Phac8g03481 1056 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 689 751 IPR013083 -
Phac8g03481 1056 Pfam PHD-finger 695 736 IPR019787 -
Phac8g03481 1056 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 882 970 IPR016181 -
Phac8g03481 1056 MobiDBLite consensus disorder prediction 1 21 - -
Phac8g03481 1056 SUPERFAMILY FYVE/PHD zinc finger 677 735 IPR011011 -
Phac8g03481 1056 Gene3D - 862 975 - -
Phac8g03481 1056 CDD Tudor_Agenet_AtDUF_rpt1_3 32 108 - -
Phac8g03481 1056 Pfam Tify domain binding domain 618 669 IPR032308 -
Phac8g03481 1056 SMART ring_2 696 735 IPR001841 -
Phac8g03481 1056 SMART ring_2 737 792 IPR001841 -
Phac8g03481 1056 MobiDBLite consensus disorder prediction 1024 1043 - -
Phac8g03481 1056 MobiDBLite consensus disorder prediction 527 552 - -
Phac8g03481 1056 ProSiteProfiles Zinc finger PHD-type profile. 693 738 IPR019787 -
Phac8g03481 1056 SMART agenet_At_2 115 172 IPR014002 -
Phac8g03481 1056 SMART agenet_At_2 28 90 IPR014002 -
Phac8g03481 1056 Pfam Acetyltransferase (GNAT) family 880 963 IPR000182 GO:0016747
Phac8g03481 1056 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 831 992 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03481 Phac-Chr8 42393288 42399349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03481 30 935 PHD Transcription Factor Family AT5G58610 35.427 3.03e-176 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac8g03481 Acetyltransf_1 0.00021 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03481 - - vra:106763506 1830.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g03481 8 42393288 42399349 Phac8g03481 8 42393288 42399349 ECH