Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03475 ATGTCAATTACCACACTTTACAGTTCCAACTCAACACACAGACAACAAAATTTAGTTATGAGTTCGTGGGTGAGAGGCAAGTGCCTCGGTAAGGGCGCGTTTGGCGTTGTCAACGCCGCGGTTTCCAAAGCCGATGGTCGCGTTTTCGCGGTGAAGTCCGTCGATCGTGGAGCGGGGCACCCCCGTCAGCTGGAGGCGTTGGAGAACGAGATTCGGATTCTGAAGAGCGTGGCGTCGCCGCACGTCGTAGCTTATCTTGGCGACGACGTCACGTGCGAGCTCGGCGGAACGGCGTCGTTTAGGAACCTTCATTTGGAGTACATGCCAGATGGCACCGTCGCTGATTTGGACCGCGCTGACTTGGACGAGCGTTCACTGAGGCGCTACGCGTGGTGCCTCGTGAGCGCCCTGCGTGACGTCCACGCCCGCGGCTTCGTGCACTGCGACGTCAAGGGGAGGAACGTGCTCCTCTCCGGCAACCGCGCCGCCGCGAAACTCGCCGACTTCGGCGCGGCGGTGGAAGTCCGAGCTTCGCCGGATTTTTTGCCCCGCGGGAGTCCGATGTGGATGGCGCCGGAGGTGGTGCGCCGGGAGCGGCAGGGGCGGGAGTCCGACGTGTGGTCGCTCGGTTGCACGGTGATCGAGATTGTCAACGGGAAACCGGCGTGGGAGGATCACGGCGCGGACACGCTGAGTCGAATCGGTTACTCGGACGAGTTGCCGGAGTTTCCGAGCAAGCTGTCGGAGGTGGGAAAAGATTTTCTTGAGAAGTGTCTGAGAAGAAATTGGAGTGAACGGTGGAGCTGCGATCAGCTACTGCAGCATCCATTTTTGGTTCCCTACGCCGTAGTTGAATCGTCGCCTCGTTGCGTTCTGGACTGGGTTGAGTCGGAGTTCGCAGAATCAGAATATAACGACGGCGAACAAGAACGAGGGTGGTTAGAATTTAACCGCGAGGAAAATTCAGTTAAAAATAGAATTAGTAAATTAGCAACAGTATCGAGGGTAAATTGGGAAACACAGGGTTGGGTAGCGGTGAGGGAAGTTGAGCTAAACGAAGAATCATCGTCATCAACAAGAAGAAGTGAAACTGAAGATGGGGTAAATTGGGAATATAGCAATGTGGGGAGATGTTCGGAATGTTGGCATTGTGAAGGGGTAAATCGGGAAATAGAAAAGTTTGATGAGGAGCGTAACAGAGGTGGAGATTGGATCTGTGATGGGTATGGGTTGGAAAAGGTGGGTTGGGTAAGGGGAATATTGAGCATTTACAGTTGTAAAACTTTGATGAGTTGTTATTTGTTGTTCTTAATGTATTTAAATATATTATGGTTTTGGGTTATTTATGCCATTTATCTCTTTACTGCACCAATAAATTGGGTGGATTGTAGAAGAAATTGA 1401 0.5232 MSITTLYSSNSTHRQQNLVMSSWVRGKCLGKGAFGVVNAAVSKADGRVFAVKSVDRGAGHPRQLEALENEIRILKSVASPHVVAYLGDDVTCELGGTASFRNLHLEYMPDGTVADLDRADLDERSLRRYAWCLVSALRDVHARGFVHCDVKGRNVLLSGNRAAAKLADFGAAVEVRASPDFLPRGSPMWMAPEVVRRERQGRESDVWSLGCTVIEIVNGKPAWEDHGADTLSRIGYSDELPEFPSKLSEVGKDFLEKCLRRNWSERWSCDQLLQHPFLVPYAVVESSPRCVLDWVESEFAESEYNDGEQERGWLEFNREENSVKNRISKLATVSRVNWETQGWVAVREVELNEESSSSTRRSETEDGVNWEYSNVGRCSECWHCEGVNREIEKFDEERNRGGDWICDGYGLEKVGWVRGILSIYSCKTLMSCYLLFLMYLNILWFWVIYAIYLFTAPINWVDCRRN* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03475 466 ProSiteProfiles Protein kinase domain profile. 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03475 466 Pfam Protein kinase domain 25 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03475 466 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 15 365 - -
Phac8g03475 466 CDD STKc_MAPKKK 22 278 - -
Phac8g03475 466 SUPERFAMILY Protein kinase-like (PK-like) 14 293 IPR011009 -
Phac8g03475 466 SMART serkin_6 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03475 466 Gene3D Transferase(Phosphotransferase) domain 1 13 358 - -
Phac8g03475 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Phac8g03475 466 FunFam Serine threonine protein kinase putative 21 331 - -
Phac8g03475 466 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03475 Phac-Chr8 42334573 42336690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03475 21 377 MAP Kinase Kinase Kinase AT1G07150 55.068 4.15e-124 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac8g03475 Pkinase 4.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03475 - - gmx:100776227 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g03475 8 42334573 42336690 Phac8g03475 8 42334573 42336690 ECH