Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03446 ATGGCGATGTGGAGAGAGATGGTGTTATTGGTGATCTTCTTCCTGTTTTCAGTCCAACGAATATGTGCTACTAACGATTGCCCCACTTCTTTCTGCGGAAAAATCACAAACATAAGTCGGCCATTCAGATTGAAACGTGATCCGATACATTGCGGCGACAGCAGGTACGAACTGGATTGTGAAAATAATGTTACCGTGTTGCATCTGTTCTCGGGAAAATATCATGTGCAGGCAATCAACTACCATAATTTCACAATCCGAGTGGCTGATCCGGGAGTCGAAGAACCAATTTGCTCCTCCCTTCCTCGCTATTTCTTGTCCGAATCCAATTTCTCTGATTCTTTTTTCGGTGACGCCATGGCTCCATACTATAGCTATCAATACCAATCTGGTGAATTTGGTCCTGCGTGGAATGATCTTTTGAAGCACATAATTTACTTGAATTGTAGCCATCCGGTGAGTGAGAAGAACAAGTACGTGAACACTGCTCCGTGTGTGAAGTGGAAGTCGAAAGGCTACATGTATGCCATCGCTGCTGGTGACTTGACAGCGTCGGAGCTTAAAGTTGGTTGTGGCGTAAAGCTGGTGTCTCCGACGTCTTGGTGGGGTTTGGAGGGAAATGAATCTTCCTACACTGATATGAACAGGGCGCTACTTTATGGATTTGAGATGTCGTGGTTGCATTTCGCCTGTCACGATCAATGTCGAAAGTCATCTTATGACCAGTGCTCTTTCAACACTTCCAGCCTCAAGCTTCAATGCGCGCCCCTCTGCCAAGATAAATTTGGAAGACTCGTAGTTCCCTGTGATAGTGGGACATGGTCACAGCTGTTAGCTTATCCACAATGTAAGGATCTATTCCTTGACACAATAACACTAACAAATCTAAGAGGTGATGAATACCTCTACTCTCATCTGGTATCATTTATTATAGGACGCTATCTTCTACCATCTTTCTTGGCAGTCAGATTTTTGTTTGGGTTGACATTACTTATTGTGCTTTTGGTATACAAATGGCGGAAAAGGAATTTGTCAATATATGAAAATATTGAAAATTATCTCGAACACAATAACATGATGCCTATTAGATACTCATACAAGGAAATCAAGAAAATGGTGAAAGGTTTTAAAGAAAAGTTGGGTGAAGGAGGCTATGGTTGTGTGTTTAGGGGAAAGTTGTCTAGTGGATCTTATGTGGCAATAAAAATGTTAGGTAAATCAAAAGGTAGTGGACAAGACTTTATAAGTGAAGTTGCCACCATAGGAAGAATATATCATCAAAATGTAGTGCAATTAATTGGATTTTGTGTTGAGGGTTCGAGACGTGCTCTTGTTTATGAATTCATGTCCAATGGATCTCTTGATAAAATTATTTTTTCTAAAGACAAAAATATAGAATTTGGCTATGACAAAATATACAATATAGCAATTGGGGTAGCTAGTGGGATTGCTTATCTCCACCATGGATGTGAGATGCAAATTTTGCATTTTGATATAAAGCCTCATAATATTCTACTTGATGATAAATTCAATCCAAAGGTCTCTGATTTTGGATTGGCAAAGTTATATCCCATAGATAATAGCATTGTCACCATGACAGCAGTAGGAGGAACAATTGGATATATGGCTCCAGAATTGTTTTATAAAAATATTGGGGGAATATCCTATAAGTCTGATGTTTATAGTTTTGGAATGCTTTTAATGGAGATGGCAAGCAGGAGGAGAAACTTAAATCCCCATGCCAAGAATTCAAGCCAAATTTATTTTCCCTCTTGGGTTTATGATCATATTAGAGAAGAGGAAGATATAAAAATGGAAGAAATGGAAGATATCACAGAGGAGGAAAAGAAAATAGTAAAGAAGATGATCATAGTTGCATTTTGGTGTATACAAATGAACCCAAATGATCGTCCCTCCATGAACAAAGTAGTGGAAATGCTTGAAGGAGACATTGAAAAATTGGAAATCCCTCCAAATTTTTCTTTATATCCATATGAAGCGACAGAAAACTCTAAACAAACCATAGCAACTGAATTTACTTGTTCTTCTAGTTGTTCTTTGGAAATTGATTAA 2073 0.3859 MAMWREMVLLVIFFLFSVQRICATNDCPTSFCGKITNISRPFRLKRDPIHCGDSRYELDCENNVTVLHLFSGKYHVQAINYHNFTIRVADPGVEEPICSSLPRYFLSESNFSDSFFGDAMAPYYSYQYQSGEFGPAWNDLLKHIIYLNCSHPVSEKNKYVNTAPCVKWKSKGYMYAIAAGDLTASELKVGCGVKLVSPTSWWGLEGNESSYTDMNRALLYGFEMSWLHFACHDQCRKSSYDQCSFNTSSLKLQCAPLCQDKFGRLVVPCDSGTWSQLLAYPQCKDLFLDTITLTNLRGDEYLYSHLVSFIIGRYLLPSFLAVRFLFGLTLLIVLLVYKWRKRNLSIYENIENYLEHNNMMPIRYSYKEIKKMVKGFKEKLGEGGYGCVFRGKLSSGSYVAIKMLGKSKGSGQDFISEVATIGRIYHQNVVQLIGFCVEGSRRALVYEFMSNGSLDKIIFSKDKNIEFGYDKIYNIAIGVASGIAYLHHGCEMQILHFDIKPHNILLDDKFNPKVSDFGLAKLYPIDNSIVTMTAVGGTIGYMAPELFYKNIGGISYKSDVYSFGMLLMEMASRRRNLNPHAKNSSQIYFPSWVYDHIREEEDIKMEEMEDITEEEKKIVKKMIIVAFWCIQMNPNDRPSMNKVVEMLEGDIEKLEIPPNFSLYPYEATENSKQTIATEFTCSSSCSLEID* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03446 690 SUPERFAMILY Protein kinase-like (PK-like) 358 648 IPR011009 -
Phac8g03446 690 Gene3D Phosphorylase Kinase; domain 1 348 448 - -
Phac8g03446 690 Coils Coil 597 617 - -
Phac8g03446 690 Pfam Wall-associated receptor kinase galacturonan-binding 27 90 IPR025287 GO:0030247
Phac8g03446 690 Gene3D Transferase(Phosphotransferase) domain 1 449 663 - -
Phac8g03446 690 FunFam serine/threonine-protein kinase PBS1-like 344 448 - -
Phac8g03446 690 PANTHER RUST RESISTANCE KINASE LR10-RELATED 347 667 IPR045874 GO:0004672
Phac8g03446 690 FunFam PR5-like receptor kinase 449 658 - -
Phac8g03446 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Phac8g03446 690 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Phac8g03446 690 Pfam Protein kinase domain 377 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03446 690 SMART serkin_6 374 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03446 690 ProSiteProfiles Protein kinase domain profile. 374 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03446 Phac-Chr8 42115068 42128111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03446 28 663 Receptor kinase-like Gene Family AT5G38260 33.538 1.45e-104 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac8g03446 Pkinase 9.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03446 - - vun:114195039 956.822