Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03438 ATGTTACATGTTACCATTTCTTGCATATATAAATTCGGATTCAGGAAAAACCAAAAACACTTGCTTCTGGGGTGGTCAACATCGAATCTTTTGGATTTTGAAATGGGTGGTAATTCTTCACCTTGTGCTTCCTGCAAGTTCTTGAGACGCCGTTGCTCTCAGGATTGCATCTTTGCTCCTTATTTTCCTTCCAATGATCTCTGCAACTTTGCCATTGTGCACAAGGTCTTTGGCTGCAGCAATATCATCAAAATGCTAAAGGATGTTCCAGTTGATCAAAGAGGAGATGCAGTGAAGAGTTTAGTTTATGAGGCAAATGCAAGAGTCAGAAACCCTGTTTATGGTTGTGTTGGAATCATATCTAACCTAGAAATTCAAGTTTCTGAGTTACAAATGCAGCTTGCAGTAGTTCAGGCAGAGATTCTCAGCATAAAAATGCAGCAAGAATTTACCTTCACCAACGGTTCTTAG 471 0.397 MLHVTISCIYKFGFRKNQKHLLLGWSTSNLLDFEMGGNSSPCASCKFLRRRCSQDCIFAPYFPSNDLCNFAIVHKVFGCSNIIKMLKDVPVDQRGDAVKSLVYEANARVRNPVYGCVGIISNLEIQVSELQMQLAVVQAEILSIKMQQEFTFTNGS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03438 156 Coils Coil 120 140 - -
Phac8g03438 156 Pfam Lateral organ boundaries (LOB) domain 41 138 IPR004883 -
Phac8g03438 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 147 - -
Phac8g03438 156 ProSiteProfiles LOB domain profile. 40 141 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03438 Phac-Chr8 42095698 42096356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03438 35 154 AS2 family AT2G30130 71.901 1.00e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac8g03438 LOB 2.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03438 - - sind:105163937 181.03