LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac8g03434	ATGAGGGAAGTACCGCATCCTGACGTCAACTTGGTGATGGATGCAATTCCATCGGGAATTATGAGGCGCCTTAAGGAAACCGTGAAGCTGATGTTGGAAGCAGGTCTTGAGGAGGAATGCAGCGACATTTACAGCAAATGGCGAAGGGAGTTTCTACAACAGTGTCTGCNNNNNNNNNNGATAAAACCAATAAAAGAAGAAAGGGTTTGGTTACTGACTTACCACGTCAAAAACAGCCTTAAGATCGGCAAGGAAGCAAGTTAA	264	0.4356	MREVPHPDVNLVMDAIPSGIMRRLKETVKLMLEAGLEEECSDIYSKWRREFLQQCLXXXXIKPIKEERVWLLTYHVKNSLKIGKEAS*	88

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac8g03434	87	SUPERFAMILY	Cullin repeat-like	10	66	IPR016159	-
	Phac8g03434	87	Gene3D	Exocyst complex component Exo70	2	82	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac8g03434	Phac-Chr8	42077593	42077856	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac8g03434	5	69	EXO70 exocyst subunit family	AT5G58430	38.462	1.38e-10	53.9

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac8g03434	-		K07195	vra:106752613	97.4413

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