Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac8g03399 | ATGAAAATCCTGGGATATTTTTCTCAGGTTCAAGCTGTACTACTGTTACTGGGAGGCCGCGAAATACCTCCAACCATGCCTACCATGCCAGTGTCTCCTCACCATAATAACCGGGGATTTACTGGTACTCCGCAAAAATTCAGTGTCCCTCAGAGATTAGCTTCATTGATTAGGTTTCGTGAAAAGCGGAAGGAACGAAATTTTGACAAAAAAATTCGGTATACTGTTCGGAAAGAAGTAGCATTAAGGATGCAAAGGAATAAAGGTCAGTTTACGTCTTCAAAGTCCAATCATGATGAATCTGCATTAGCATTAACAAATTGGGGGCCGAACGAAAACTGGTCAGCAGAGAATAACGGTTCCCAGCAGCAAGATATTGTTTGTAGGCATTGTGGCATCAGTGAGAAGTGCACACCAATGATGCGACGCGGGCCTGAAGGGCCAAGAACCCTCTGCAATGCTTGTGGTCTTATGTGGGCAAATAAGGGAACCCTGAGGGACCTATCAAGGGCGCCACCCATATCTGGACCAATAAAAAATGAGAATAAAAGTGTAGAGGCCAACCAGATAGTCCTTAGAGTTGCAGGAGAAGCTGATGATTCGTCGTGA | 609 | 0.4483 | MKILGYFSQVQAVLLLLGGREIPPTMPTMPVSPHHNNRGFTGTPQKFSVPQRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKSNHDESALALTNWGPNENWSAENNGSQQQDIVCRHCGISEKCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSRAPPISGPIKNENKSVEANQIVLRVAGEADDSS* | 203 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac8g03399 | 202 | ProSiteProfiles | CCT domain profile. | 52 | 94 | IPR010402 | GO:0005515 | |
Phac8g03399 | 202 | Pfam | CCT motif | 52 | 94 | IPR010402 | GO:0005515 | |
Phac8g03399 | 202 | ProSitePatterns | GATA-type zinc finger domain. | 128 | 155 | IPR000679 | GO:0006355|GO:0043565 | |
Phac8g03399 | 202 | CDD | ZnF_GATA | 127 | 183 | IPR000679 | GO:0006355|GO:0043565 | |
Phac8g03399 | 202 | PANTHER | GATA TRANSCRIPTION FACTOR 28 | 9 | 179 | IPR045280 | GO:0006355 | |
Phac8g03399 | 202 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 123 | 174 | - | - | |
Phac8g03399 | 202 | ProSiteProfiles | GATA-type zinc finger domain profile. | 122 | 181 | IPR000679 | GO:0006355|GO:0043565 | |
Phac8g03399 | 202 | SMART | GATA_3 | 122 | 175 | IPR000679 | GO:0006355|GO:0043565 | |
Phac8g03399 | 202 | Pfam | GATA zinc finger | 128 | 164 | IPR000679 | GO:0006355|GO:0043565 | |
Phac8g03399 | 202 | Gene3D | - | 118 | 186 | IPR013088 | GO:0006355|GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac8g03399 | Phac-Chr8 | 41839602 | 41845352 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac8g03399 | 9 | 201 | Tify Gene Family | AT1G51600 | 66.000 | 1.97e-90 | 265 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-GATA | Phac8g03399 | CCT | 4.6e-15 | CL0281 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac8g03399 | - | - | pvu:PHAVU_008G254600g | 400.208 |