Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03398 ATGGATGGTATTCACGGGGGTGATTCTCGGATACACATCAGTGATGGACAGCATCCTATACATGTGCCATATGTGCAAGAACATGAGCATCATGGACTGCACCATATGAGCAACGGGAATGGGATTGATGAGGATCAGAATGATGGTGGTGATACTAACTGTGGTGGAAGTGAGAGTGTGGAAGGTGATATCCCTTCCAGTCATGGAAATCTCCCTGACAATCACGGTGTAATAATGCATCAAGGGGGTGATGCTGGGGATCAGCTTACGTTGTCTTTTCAGGGCCAAGTTTATGTCTTTGACTCCGTGTCTCCAGAAAAGGTTCAAGCTGTACTACTGTTACTGGGAGGCCGCGAAATACCTCCAACCATGCCTACCATGCCAGTGTCTCCTCACCATAATAACCGGGGATTTACTGGTACTCCGCAAAAATTCAGTGTCCCTCAGAGATTAGCTTCATTGATTAGGTTTCGTGAAAAGCGGAAGGAACGAAATTTTGACAAAAAAATTCGGTATACTGTTCGGAAAGAAGTAGCATTAAGACTGAGTGGGAACATCGGAAGAAAGGGTACAGCAGTAGATTGGGAACAATGGAACAACGGAACAGTAGATCAGTGGAAGATTGGGAACAATGGAACAGGGAAACGTCAGAACAGTGATTATGAACTGAGCGAGTAG 678 0.4543 MDGIHGGDSRIHISDGQHPIHVPYVQEHEHHGLHHMSNGNGIDEDQNDGGDTNCGGSESVEGDIPSSHGNLPDNHGVIMHQGGDAGDQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREIPPTMPTMPVSPHHNNRGFTGTPQKFSVPQRLASLIRFREKRKERNFDKKIRYTVRKEVALRLSGNIGRKGTAVDWEQWNNGTVDQWKIGNNGTGKRQNSDYELSE* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03398 225 PANTHER GATA TRANSCRIPTION FACTOR 28 26 187 IPR045280 GO:0006355
Phac8g03398 225 MobiDBLite consensus disorder prediction 40 64 - -
Phac8g03398 225 Pfam tify domain 87 116 IPR010399 -
Phac8g03398 225 MobiDBLite consensus disorder prediction 206 225 - -
Phac8g03398 225 ProSiteProfiles CCT domain profile. 150 192 IPR010402 GO:0005515
Phac8g03398 225 Pfam CCT motif 150 180 IPR010402 GO:0005515
Phac8g03398 225 ProSiteProfiles Tify domain profile. 82 117 IPR010399 -
Phac8g03398 225 MobiDBLite consensus disorder prediction 32 76 - -
Phac8g03398 225 SMART tify_2 82 117 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03398 Phac-Chr8 41839602 41845352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03398 1 192 Tify Gene Family AT1G51600 63.077 8.81e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac8g03398 CCT 1.4e-09 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03398 - - pvu:PHAVU_008G254600g 389.037