Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03359 ATGTCTCTCCGAAATTTCAATCCTCTGGAACAGAAAAGGCTATGCAGAGTTGTGGGATTTATCTCCAGTGTGATTGGACTTATCTGTTATGCGTTGAGTTCCTCTTTCAACCATCTATTTGGAGAGTGGAACTTGTTGAAGATCATCCTTTACACCATGGTAAGCTTCTCTATCAGCAGCATCGTGTTATTTATGAAGAAATGGAAACGTTCCAGGTTTTTCTCGCTGAAAGTTCACGTGGGTGTTCTGGTTTTGTTGCTCACTTCTTTCTACTCTTTCGTATCTGATAAATCTGCGAATGGAAAACCAAACGGATTAAGTTTGATTTCGTGTGGAGCCTTTGCTTTGATGTCTTTGTGTCTTTCAAGGCAGATCGACCTAGGGTTTGGAGCAGATCTCCTCAATTTCTTCCTTGGATGTCTAACTGTTCAACTTATGGAGATCAATTTGATGCTCTTTATTGTTGCAGCCATCTTGTGCTATTGTTTCATGATTCTTCGTTCTAAAAAGTCTGAGTCAGAGATTGGAACAATACCAATGGAAGACCACGTAAGCATAGAACTTGGTACTGCAGATGGTGGAGAAAGAGGAGCCGATGACCAACAAATTCCATTGTTAACAATGGTAGGAGATGGGTACAATTGGAAAAAATATGAAGATAAAGCAGGGAAAGGGAATGAAAATCAAGTAAGTTACTATAAATGCACACACCCCAATTGTTATGTGAAGAAAAAAGTTGTTAGAACTATAGATGGGAAAATTGTTGAGATAAATTACCAGGGTAACCATGCACACTGGAAGCGTCTGAATAACATGAAGAGGAACTCTTCATCTGAATATCTATATTCACGGCTAACTTCAGACTCTGTCACCACTGAATCATTTGCCTCCCAGAGCAACCAACTATTGGATTATGATGTGCAGTTCAAGAGAACTCATCATGGACGTTCAGATGAGGAGTTTCTTACAATTGATCGTCATCCCGAGGCCCAAGCTAAGGTGTTTAAGCATAATTGCAGGTCAAAGTGTTTGGGTGTTGTGAACAAGCAGTTAAGTTTGGAACAAAAATCTACTATATAG 1080 0.3963 MSLRNFNPLEQKRLCRVVGFISSVIGLICYALSSSFNHLFGEWNLLKIILYTMVSFSISSIVLFMKKWKRSRFFSLKVHVGVLVLLLTSFYSFVSDKSANGKPNGLSLISCGAFALMSLCLSRQIDLGFGADLLNFFLGCLTVQLMEINLMLFIVAAILCYCFMILRSKKSESEIGTIPMEDHVSIELGTADGGERGADDQQIPLLTMVGDGYNWKKYEDKAGKGNENQVSYYKCTHPNCYVKKKVVRTIDGKIVEINYQGNHAHWKRLNNMKRNSSSEYLYSRLTSDSVTTESFASQSNQLLDYDVQFKRTHHGRSDEEFLTIDRHPEAQAKVFKHNCRSKCLGVVNKQLSLEQKSTI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03359 359 Gene3D WRKY domain 203 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03359 359 Pfam WRKY DNA -binding domain 211 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03359 359 SMART WRKY_cls 209 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03359 359 SUPERFAMILY WRKY DNA-binding domain 207 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03359 359 ProSiteProfiles WRKY domain profile. 204 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03359 359 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 202 310 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03359 Phac-Chr8 41643307 41646504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03359 211 296 WRKY Transcription Factor Family AT4G26440 47.674 4.41e-18 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g03359 WRKY 6.4e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03359 - - gmx:102667674 436.032