Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03351 ATGGCTTCTTCCACCGGTAGTTTAGACACCTCTGCAACTGCAAACTCCTTCACCAACTTCACCTTCTCCACACACCCCTTCATGACCACTTCTTTCTCTGACCTCCTTCTTTCTCCCACAGACAACAAGCCTCAGGGTGGCTTGTCTGAGAGAAATGCCTCTGGTGTCCCCAAATTCAAGTCCACCCCACCTCCTTCTTTGCCTCTCTCCCCTCCTCCCATTTCTCCTTCTTCTTACTTCGCTATTCCACCTGGTTTGAGCCCTGCTGAGCTTCTTGACTCTCCGGTTCTCCTTAGCGCTTCTAACATACTGCCATCTCCAACAACTGGAGCATTTGTTTCTCAGAGCTTCAATTGGAAGAGCAGTTCAGGGGGAAACCAGCAAATTGTCAAAGAAGAAGACAAAAGCTTCTCAAACTTCTCTTTCCAGCCCCAGCCAAGGCCTCCTGCTTCATCCACAGTAACATATCAATCTTCAAATGTTGCAGTTCAAAACCAACATCCATGGAATTTTCAGGAGACCACAAAGCAAGATAGTTTTTCTTCAGGGAAGAGTATGATGAAAACTGAAAACTCTTCTTCCATGCATAGTTTCCCCCCTGAGATTGCTAGTGTCCAAACTAACCATAGCAATGGGTTTCAATCTGATTTTGGAAATTATCCCCCACAATCTCAGACCTTAAGCAGAAAGTCAGATGATGGATACAATTGGAGGAAGTATGGCCAAAAACAAGTGAAAGGGAGTGAAAATCCAAGAAGTTATTACAAATGCACATACCCAAATTGCCCTACGAAGAAGAAGGTCGAGAGGTCTTTAGATGGACAAATTACTGAGATAGTTTATAAGGGTACTCATAACCATCCCAAGCCTCAATCTACTAGGAGAAACTCATCATCTTCCTCTTCTCTTGCAATCCCTCCTTCAAATCCCATCAGCACTGAAATCCAAGATCAATCATATGCCACTCATGGTAGTGGACAAATGGATTCCGCCGCCACCCCAGATAACTCATCAATATCAATAGGAGATGATGATTTTGAGCAGAGTTCTCAAAAGTGTAAATCAGGAGGAGATGAATATGATGAAGATGAACCTGAGGCAAAAAGATGGAAAATTGAAGCAGAAAATGAGGGTATGTCAGCGCCTGGTAGTAGAACAGTGAGAGAACCTAGAGTTGTGGTTCAGACAACCAGTGACATTGATATCCTAGATGATGGGTACAGATGGAGAAAATATGGACAGAAAGTTGTAAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGCACACACCCAGGATGTCCAGTGAGGAAGCACGTGGAACGAGCCTCACATGACCTAAGGGCTGTGATCACAACTTATGAGGGAAAGCATAACCATGATGTCCCTGCAGCCCGTGGCAGTGGTGGTCATTCTGTTAACAGACCCCTGCCAAACAATGCTGCAAACCCCACCACCGCAGCCACTGCCATAAGGCCATTGGCAGTGAACCATCCCACTGACAATTCCGTTCAAAGCCAAAGGCCACAAGCACCACCTGAAGGGCAATCACCCTTCACCCTAGAGATGCTACAAAGTCCAGGAAGTTTTGGATTCTCGGGTTTTGGGAATCCAATGGGATCTTACATGAATCAGCAACAATTATCTGACAATGTTTTCTCCTCCAGAACCAAGGAGGAGCCCAGAGATGACGTGTTCCTTGAGTCTCTACTATGCTGA 1719 0.4538 MASSTGSLDTSATANSFTNFTFSTHPFMTTSFSDLLLSPTDNKPQGGLSERNASGVPKFKSTPPPSLPLSPPPISPSSYFAIPPGLSPAELLDSPVLLSASNILPSPTTGAFVSQSFNWKSSSGGNQQIVKEEDKSFSNFSFQPQPRPPASSTVTYQSSNVAVQNQHPWNFQETTKQDSFSSGKSMMKTENSSSMHSFPPEIASVQTNHSNGFQSDFGNYPPQSQTLSRKSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQSTRRNSSSSSSLAIPPSNPISTEIQDQSYATHGSGQMDSAATPDNSSISIGDDDFEQSSQKCKSGGDEYDEDEPEAKRWKIEAENEGMSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGGHSVNRPLPNNAANPTTAATAIRPLAVNHPTDNSVQSQRPQAPPEGQSPFTLEMLQSPGSFGFSGFGNPMGSYMNQQQLSDNVFSSRTKEEPRDDVFLESLLC* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03351 572 Gene3D WRKY domain 390 456 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03351 572 ProSiteProfiles WRKY domain profile. 398 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03351 572 SMART WRKY_cls 231 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03351 572 SMART WRKY_cls 403 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03351 572 MobiDBLite consensus disorder prediction 347 366 - -
Phac8g03351 572 MobiDBLite consensus disorder prediction 498 523 - -
Phac8g03351 572 MobiDBLite consensus disorder prediction 175 231 - -
Phac8g03351 572 SUPERFAMILY WRKY DNA-binding domain 395 463 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03351 572 FunFam WRKY transcription factor 222 291 - -
Phac8g03351 572 FunFam WRKY transcription factor 33 390 456 - -
Phac8g03351 572 MobiDBLite consensus disorder prediction 281 366 - -
Phac8g03351 572 Pfam WRKY DNA -binding domain 404 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03351 572 Pfam WRKY DNA -binding domain 232 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03351 572 MobiDBLite consensus disorder prediction 535 554 - -
Phac8g03351 572 Gene3D WRKY domain 219 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03351 572 MobiDBLite consensus disorder prediction 457 484 - -
Phac8g03351 572 MobiDBLite consensus disorder prediction 175 235 - -
Phac8g03351 572 SUPERFAMILY WRKY DNA-binding domain 230 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g03351 572 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 92 498 IPR044810 GO:0003700
Phac8g03351 572 ProSiteProfiles WRKY domain profile. 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g03351 572 MobiDBLite consensus disorder prediction 38 71 - -
Phac8g03351 572 MobiDBLite consensus disorder prediction 535 565 - -
Phac8g03351 572 MobiDBLite consensus disorder prediction 286 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03351 Phac-Chr8 41590382 41593858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03351 229 571 WRKY Transcription Factor Family AT2G38470 56.180 7.78e-113 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g03351 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03351 K13424 - gmx:100127393 998.808