Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03323 ATGGATATATCTTTGTTGAAGGTTCTATCTGATGCAATTTCCTCATTTTTGCATTTATCATTTTCTGAAAAGATGAAGTTAGAACCTGTATCAAAATATTACCAAAAGGCAGAGGAGATGCTTAAGCTGTTGAAGCCAATTATTGATACTACTGTTTTTTCAGATATAGCTTCTAATGAAGTGCTTAGGAAACTATTTGAGGAACTTTGTCCGGCAGTTGATGAGTTGAGGGAGCTCATTCTGAACTGGCATCCATTATCTAGCAAGTTTTACTTTGTTAATCAAGTTGATCCCTTAGTATCAACAATTCAGGCCTTCGGTGTCAGCATTTTACAACAGCTGAAGGATTTGCCGCAATGTCTCCCTGATAATTTGGGAAATGAAACATCATCAACCATTAAAAAAGCTATTTTGGAACAACTGGAAGGTGTAGGACCAAGTTTGGAGGTCCTGGAAAACATTGCTGACAACCTGAGTCTTAGGTCTAATCAAGAGGTCCTGATTGAGGCTGTATCCCTTGAAAAGTTGAAGGAGAAGGCTGAACAAATTGAAAACACTTCAGAAGTTGAATATATTGATAAAATGATCTCAGTTGTAAATCGAATGCATGAGCATCTTGTTATGCTTAAGCAAGCTCAGAGTTCTATCCCAGTGCCCGTTCCTGCTGATTTTTGCTGTCCACTTTCTTTGGAATTGATGACAGATCCGGTCATTGTGGCATCTGGACAAACATATGAGCGGGCTTTCATCAAGAACTGGATTGACCTAGGTCTCACTGTTTGTCCAAAGACACGCCAGACTCTGGTGCACACCAATCTAATACCTAACTACACTGTAAAAGCATTAATTGCTAACTGGTGTGAAACACATGATGTGAAGCTTCCTGATCCCATTAAGTACAAAAACTTAAATCAACCATCTCCCTTTCATGGATCTATGGAGTCTGGTTTGATCAAGAATTCGCTTGTTATAACTAGTGGTGAACCCCACCAAGAACGAACATCAACATTGCATCCCTCTTCTAATCCAGGTGGTTCTTTAAATGGCACGGTTCATGAGCCATATGCGGATCTTGAAAGAATATCACACACAGGTTCAGATGATGGATCTGCCAGCTCACATGAAGGGAGCGTCGATTCAGTTGGTGAATCATTAACATCTCCATCCAGAAATGCCTTGAGCTCAGAACAATCTCAAACTGATGTTAGAACTACTGATACCAACAATACTCTGCTGTCAACCACTTCAGTCTACAGTCGGGATGCTTTTGGTGAATTGAATGCAGGGCAAGATGCTATTCCCTTGCCAACTCGGCATAGAGAATCTGAGTTTTCATCCCAATTAGCAGTGCCAAGGTCTCGAAGCCAAACTATATGGCAACGGTCATCCGAGTGGCTTGTTCCTAGGGTAGTGTCTATTGAAACAAGAGCTGATCTTTCTGCTGCTGAAACCCAGGTTCAGAAATTAGTGGAGCAGCTAAAGATTGATTCTCTTGATGCTAAGAGAGAGGCAACATCTGAACTTCGCCTTCTTGCTAAGCACAATATGGATAACCGAATTGTGATTTCAAATTGTGGAGCGATTAGCTTATTAGTTGATTTACTGCAATCAACTGATTCTATGATCCAGGAAAATTCTGTTACAGCACTCCTTAACTTATCAATCAATGATAACAACAAGGCTGCTATTGCAAATGCGGGTGCAATTGAACCTTTGATTCATGTCCTTAAGACAGGGAGTCCAGAAGCCAAGGAAAATTCAGCTGCCACTCTTTTCAGCCTCTCAGTTACTGAGGAAAACAAAATCAGGATAGGGAGGTCTGGGGCAATTAGACCACTGGTTGACTTGTTGGGGAACGGAAGCCCTAGGGGGAAGAAAGATGCTGCCACTGCCTTGTTTAATCTGTCCATATTTCATGAAAACAAGGACCGGATTGTGCAAGCTGGTGCTGTGAAACACCTTGTAGAGTTAATGGACCCAGCAGCTGGAATGGTCGACAAGGCTGTGGCTGTTTTAGCAAATCTTGCTACAATACCAGAAGGGAAAGCAGCAATTGGTGATCAAGGTGGGATTCCTGTTTTGGTTGAGGTTATTGAGTTGGGTTCTGTGAGAGGAAAGGAGAATGCTGCAGCGGCTCTTCTACATCTATGCTCAGACAATCACAGATATTTAAACAGGGTGCTCCAAGAAGGAGCCGTGCCACCTTTGGTAGCTTTGTCACAATCAGGCACCCCAAGGGCCAAAGAAAAGGCCCTTGCGCTCCTTAATCAATTTAGAAGCCAAAGACACGGTGGTGGTGGGAGAGCTTGA 2310 0.4242 MDISLLKVLSDAISSFLHLSFSEKMKLEPVSKYYQKAEEMLKLLKPIIDTTVFSDIASNEVLRKLFEELCPAVDELRELILNWHPLSSKFYFVNQVDPLVSTIQAFGVSILQQLKDLPQCLPDNLGNETSSTIKKAILEQLEGVGPSLEVLENIADNLSLRSNQEVLIEAVSLEKLKEKAEQIENTSEVEYIDKMISVVNRMHEHLVMLKQAQSSIPVPVPADFCCPLSLELMTDPVIVASGQTYERAFIKNWIDLGLTVCPKTRQTLVHTNLIPNYTVKALIANWCETHDVKLPDPIKYKNLNQPSPFHGSMESGLIKNSLVITSGEPHQERTSTLHPSSNPGGSLNGTVHEPYADLERISHTGSDDGSASSHEGSVDSVGESLTSPSRNALSSEQSQTDVRTTDTNNTLLSTTSVYSRDAFGELNAGQDAIPLPTRHRESEFSSQLAVPRSRSQTIWQRSSEWLVPRVVSIETRADLSAAETQVQKLVEQLKIDSLDAKREATSELRLLAKHNMDNRIVISNCGAISLLVDLLQSTDSMIQENSVTALLNLSINDNNKAAIANAGAIEPLIHVLKTGSPEAKENSAATLFSLSVTEENKIRIGRSGAIRPLVDLLGNGSPRGKKDAATALFNLSIFHENKDRIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGKAAIGDQGGIPVLVEVIELGSVRGKENAAAALLHLCSDNHRYLNRVLQEGAVPPLVALSQSGTPRAKEKALALLNQFRSQRHGGGGRA* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03323 769 Gene3D - 561 663 IPR011989 -
Phac8g03323 769 Pfam U-box domain 220 290 IPR003613 GO:0004842|GO:0016567
Phac8g03323 769 SUPERFAMILY ARM repeat 485 758 IPR016024 -
Phac8g03323 769 FunFam RING-type E3 ubiquitin transferase 219 294 - -
Phac8g03323 769 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 567 609 IPR000225 GO:0005515
Phac8g03323 769 Gene3D - 664 763 IPR011989 -
Phac8g03323 769 Coils Coil 163 193 - -
Phac8g03323 769 SMART Ubox_2 223 286 IPR003613 GO:0004842|GO:0016567
Phac8g03323 769 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 526 568 IPR000225 GO:0005515
Phac8g03323 769 Pfam Armadillo/beta-catenin-like repeat 598 636 IPR000225 GO:0005515
Phac8g03323 769 Pfam Armadillo/beta-catenin-like repeat 640 676 IPR000225 GO:0005515
Phac8g03323 769 Pfam Armadillo/beta-catenin-like repeat 556 595 IPR000225 GO:0005515
Phac8g03323 769 Pfam Armadillo/beta-catenin-like repeat 517 554 IPR000225 GO:0005515
Phac8g03323 769 Pfam Armadillo/beta-catenin-like repeat 679 718 IPR000225 GO:0005515
Phac8g03323 769 SUPERFAMILY RING/U-box 209 297 - -
Phac8g03323 769 PANTHER U BOX DOMAIN-CONTAINING 29 757 - -
Phac8g03323 769 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 608 650 IPR000225 GO:0005515
Phac8g03323 769 MobiDBLite consensus disorder prediction 328 408 - -
Phac8g03323 769 ProSiteProfiles U-box domain profile. 219 293 IPR003613 GO:0004842|GO:0016567
Phac8g03323 769 CDD RING-Ubox_PUB 221 273 IPR045210 -
Phac8g03323 769 SMART arm_5 556 596 IPR000225 GO:0005515
Phac8g03323 769 SMART arm_5 597 637 IPR000225 GO:0005515
Phac8g03323 769 SMART arm_5 678 718 IPR000225 GO:0005515
Phac8g03323 769 SMART arm_5 515 555 IPR000225 GO:0005515
Phac8g03323 769 SMART arm_5 719 760 IPR000225 GO:0005515
Phac8g03323 769 SMART arm_5 638 677 IPR000225 GO:0005515
Phac8g03323 769 Gene3D - 460 560 IPR011989 -
Phac8g03323 769 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 649 690 IPR000225 GO:0005515
Phac8g03323 769 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 200 295 IPR013083 -
Phac8g03323 769 FunFam RING-type E3 ubiquitin transferase 470 764 - -
Phac8g03323 769 MobiDBLite consensus disorder prediction 328 348 - -
Phac8g03323 769 MobiDBLite consensus disorder prediction 365 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03323 Phac-Chr8 41386671 41394339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03323 180 769 U-box Gene Family AT2G23140 59.875 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03323 - - gmx:100777715 1236.86