Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03319 ATGTTTGGACATCAAGAGATAGATAGATTAGATGAGATAACAAAAATCAGAGCAGAGGTAGAAGCATCTTCTCAAATGGGAAGGAAGCATTTCTATGGTCCAATTCCTGGGATAACCTTAAACACAGTAACCCCTTGTGCTGCATGCAAGCTTCTGAGAAGAAGGTGTGCTGAAGAATGCCCTTTCTCTCCTTATTTTTCACCACATGAGCCTCAAAAGTTTGTAGCCGTTCACAAAGTGTTTGGTGCAAGCAATGTCTCCAAGATGCTTCTGGAGGTTCCAGAGGGCCAAAGAGCTGATGCAGCAAATAGCCTTGTTTACGAAGCTAACCTGAGGCTAAGAGATCCTGTATACGGATGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAATCTTTACAAGCAGAACTAAATGCAATAAGGGAAGAGATACTAAAATACAAATATAGAGAAGCTGCGAGTCTCATTTCTTCTAATCATGCAGCTTTGGTTTCTTCAGCTGATGCAATATCAGCAGCAATTCCCGCAAACTCACAACCACAAGGTCTTTCTCAACTTCCTCCTCCTCCTCTACCAAAACAATTGCCTGCTCCTCCACTAAAACCATTGCCTTCTCCTTCTGTTATCCTTTCATCCTTCTCTTCATCTTCAACTTCTTCTGTGTACACTCCACCTAAAAGCTCAATGAGCCTTGGATCCATTTCCACCACTGAAAATGTCCCATACTTTGTTTAG 738 0.4228 MFGHQEIDRLDEITKIRAEVEASSQMGRKHFYGPIPGITLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFVAVHKVFGASNVSKMLLEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNAIREEILKYKYREAASLISSNHAALVSSADAISAAIPANSQPQGLSQLPPPPLPKQLPAPPLKPLPSPSVILSSFSSSSTSSVYTPPKSSMSLGSISTTENVPYFV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03319 245 MobiDBLite consensus disorder prediction 179 199 - -
Phac8g03319 245 ProSiteProfiles LOB domain profile. 44 145 IPR004883 -
Phac8g03319 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 41 188 - -
Phac8g03319 245 Pfam Lateral organ boundaries (LOB) domain 45 141 IPR004883 -
Phac8g03319 245 MobiDBLite consensus disorder prediction 183 199 - -
Phac8g03319 245 Coils Coil 124 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03319 Phac-Chr8 41372896 41375103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03319 26 158 AS2 family AT2G30340 79.104 1.34e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac8g03319 LOB 2.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03319 - - ccaj:109795340 346.28