Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03318 ATGGGAAGGAAGCATTTCTATGGTCCAATTCCTGGGATAACCTTAAACACAGTAACCCCTTGTGCTGCATGCAAGCTTCTGAGAAGAAGGTGTGCTGAAGAATGCCCTTTCTCTCCTTATTTTTCACCACATGAGCCTCAAAAGTTTGTAGCCGTTCACAAAGTGTTTGGTGCAAGCAATGTCTCCAAGATGCTTCTGGAGGTTCCAGAGGGCCAAAGAGCTGATGCAGCAAATAGCCTTGTTTACGAAGCTAACCTGAGGCTAAGAGATCCTGTATACGGATGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAATCTTTACAAGCAGAACTAAATGCAATAAGGGAAGAGATACTAAAATACAAATATAGAGAAGCTGCGAGTCTCATTTCTTCTAATCATGCAGCTTTGGTTTCTTCAGCTGATGCAATATCAGCAGCAATTCCCGCAAACTCACAACCACAAGGTCTTTCTCAACTTCCTCCTCCTCCTCTACCAAAACAATTGCCTGCTCCTCCACTAAAACCATTGCCTTCTCCTTCTGTTATCCTTTCATCCTTCTCTTCATCTTCAACTTCTTCTGTGTACACTCCACCTAAAAGCTCAATGAGCCTTGGATCCATTTCCACCACTGAAAATGTCCCATACTTTGTTTAG 663 0.4314 MGRKHFYGPIPGITLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFVAVHKVFGASNVSKMLLEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNAIREEILKYKYREAASLISSNHAALVSSADAISAAIPANSQPQGLSQLPPPPLPKQLPAPPLKPLPSPSVILSSFSSSSTSSVYTPPKSSMSLGSISTTENVPYFV* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03318 220 MobiDBLite consensus disorder prediction 154 174 - -
Phac8g03318 220 Pfam Lateral organ boundaries (LOB) domain 20 116 IPR004883 -
Phac8g03318 220 Coils Coil 99 126 - -
Phac8g03318 220 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Phac8g03318 220 MobiDBLite consensus disorder prediction 158 174 - -
Phac8g03318 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03318 Phac-Chr8 41372896 41375103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03318 1 133 AS2 family AT2G30340 79.104 4.46e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac8g03318 LOB 1.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03318 - - ccaj:109795340 305.449