Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03316 ATGTTTTTGGTTTCTGGTGATGGTGCTGAGGGCATCATGCTCTTACACCACCCAATATACGAATTATTATTTCTTTACAGACTCATGGTTTTAACATGCAGTTTTTGTATTTTTCCCAAAGATAGATTAGATGAGATAACAAAAATCAGAGCAGAGGTAGAAGCATCTTCTCAAATGGGAAGGAAGCATTTCTATGGTCCAATTCCTGGGATAACCTTAAACACAGTAACCCCTTGTGCTGCATGCAAGCTTCTGAGAAGAAGGTGTGCTGAAGAATGCCCTTTCTCTCCTTATTTTTCACCACATGAGCCTCAAAAGTTTGTAGCCGTTCACAAAGTGTTTGGTGCAAGCAATGTCTCCAAGATGCTTCTGGAGGTTCCAGAGGGCCAAAGAGCTGATGCAGCAAATAGCCTTGTTTACGAAGCTAACCTGAGGCTAAGAGATCCTGTATACGGATGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAATCTTTACAAGCAGAACTAAATGCAATAAGGGAAGAGATACTAAAATACAAATATAGAGAAGCTGCGAGTCTCATTTCTTCTAATCATGCAGCTTTGGTTTCTTCAGCTGATGCAATATCAGCAGCAATTCCCGCAAACTCACAACCACAAGGTCTTTCTCAACTTCCTCCTCCTCCTCTACCAAAACAATTGCCTGCTCCTCCACTAAAACCATTGCCTTCTCCTTCTGTTATCCTTTCATCCTTCTCTTCATCTTCAACTTCTTCTGTGTACACTCCACCTAAAAGCTCAATGAGCCTTGGATCCATTTCCACCACTGAAAATGTCCCATACTTTGTTTAG 837 0.4158 MFLVSGDGAEGIMLLHHPIYELLFLYRLMVLTCSFCIFPKDRLDEITKIRAEVEASSQMGRKHFYGPIPGITLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFVAVHKVFGASNVSKMLLEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNAIREEILKYKYREAASLISSNHAALVSSADAISAAIPANSQPQGLSQLPPPPLPKQLPAPPLKPLPSPSVILSSFSSSSTSSVYTPPKSSMSLGSISTTENVPYFV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03316 278 Coils Coil 157 184 - -
Phac8g03316 278 MobiDBLite consensus disorder prediction 216 232 - -
Phac8g03316 278 MobiDBLite consensus disorder prediction 248 267 - -
Phac8g03316 278 MobiDBLite consensus disorder prediction 212 232 - -
Phac8g03316 278 Pfam Lateral organ boundaries (LOB) domain 78 174 IPR004883 -
Phac8g03316 278 ProSiteProfiles LOB domain profile. 77 178 IPR004883 -
Phac8g03316 278 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 74 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03316 Phac-Chr8 41372896 41375103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03316 59 191 AS2 family AT2G30340 79.104 1.42e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac8g03316 LOB 3.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03316 - - ccaj:109795340 333.569