LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac8g03307	ATGGGGAACAACAGGTTTAAGTTGTCAGATATGATGCCAAATGCTTGGTTTTACAAGCTCAAAGATATGAGCAGATCAAGAAAGAGAAATGGTTCTCATGTTATGAAGAGTAAAGTATCTTCACCAACATCTCAAAGGTCGCTGCCAAGATATTCACACTATTTCTCCTCTGAGCCAATCAGAGCTGGTAAGCTATACAACACTCCCATTCACACCAGAGACTTGGACATGCCATTCACTGATTCACCTAGAAGGTCAGCCAAGAGAAGGACAAGGAGAAAAACCATTTACAAGCCTTCTCCCACTGTTGTTTCTTCGTCTTTCATACCAACTTCCAACTACGACTCCACCAATCATTGGATCAAACCATACCAAGTTCAGTCACCAGATTATGATGTGTCTACAGTTGAAAGCTCTTCTGAATCTGATCTCCATGAATATGCCTATTCTGAGTCTGAATGTGACAGTTTTTCTGTTCCTGATTTACTTAATGGAATGGCCTCTAATGGCAGCTGCAGAGTTAGCTCTTCCACTAATGACATCATCATTGACATGAACAACGAGTCCTTCCTTGGGAACTATGAAAACCAAGATGGGTTTGATGCAATTTCACAGCTAGGTCTTGCTCCAATATTGACGAAGCCAGTGAAGTTTGATGACAAGGTCATTGAAGCCAATGAGTTGAGAAGTTCAACTGAATGGGATGAGCTGCAGGATGATCAGTCTTTCTCAATTGAAATCAACAAAGAGGAAGGCAATAGAACTCAAAGGAGGAGAAAAAGCAGTCATAGAAAGCCCTTCACTAATTCTTCTGGCATAAGGCTTAGAATCAATTCTCCAAAACTTGCTAGCAGAAAAATTCAAGCCTGTGCAAGAAGGAGTGTGTCATCCACTGCAAGCAGAGCTTCAAGGGGTACAAGCTTTCCCGATGGCTTTGCTGTTGTGAAGTCCTCATTTGATCCACAGAGTGACTTCAGGGAGTCAATGGTGGAGATGATTGTGGAGAACAACATCCGAGCTTCGAAAGATTTGGAGGACCTACTTGCCTGCTACCTTTCCCTCAATTCAAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTTGACTTGGCTCAACTTAGAATGTAA	1140	0.4175	MGNNRFKLSDMMPNAWFYKLKDMSRSRKRNGSHVMKSKVSSPTSQRSLPRYSHYFSSEPIRAGKLYNTPIHTRDLDMPFTDSPRRSAKRRTRRKTIYKPSPTVVSSSFIPTSNYDSTNHWIKPYQVQSPDYDVSTVESSSESDLHEYAYSESECDSFSVPDLLNGMASNGSCRVSSSTNDIIIDMNNESFLGNYENQDGFDAISQLGLAPILTKPVKFDDKVIEANELRSSTEWDELQDDQSFSIEINKEEGNRTQRRRKSSHRKPFTNSSGIRLRINSPKLASRKIQACARRSVSSTASRASRGTSFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDLIVKAFEQIWFDLAQLRM*	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac8g03307	379	ProSiteProfiles	OVATE domain profile.	314	373	IPR006458	-
	Phac8g03307	379	PANTHER	TRANSCRIPTION REPRESSOR OFP7-RELATED	127	375	IPR038933	GO:0045892
	Phac8g03307	379	MobiDBLite	consensus disorder prediction	240	272	-	-
	Phac8g03307	379	MobiDBLite	consensus disorder prediction	27	48	-	-
	Phac8g03307	379	Pfam	DNA-binding domain	1	41	IPR025830	GO:0003677
	Phac8g03307	379	Pfam	Transcriptional repressor, ovate	318	374	IPR006458	-
	Phac8g03307	379	NCBIfam	uncharacterized plant-specific domain TIGR01568	312	375	IPR006458	-
	Phac8g03307	379	MobiDBLite	consensus disorder prediction	74	93	-	-
	Phac8g03307	379	MobiDBLite	consensus disorder prediction	240	257	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac8g03307	Phac-Chr8	41289227	41290698	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	OFP	Phac8g03307		Ovate	3.6e-25	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac8g03307	-		-	gmx:100780926	662.144