Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03299 ATGCAAGATCCATCTTCAAACCCTAATTCCAATCCCAATCCCAATCCTCACAATGCCAATGCCGCATCCCAGCCACCGCGACCATCGCCGTCCACGGCGGCCACCGCCGCTGGCGCCTCCTCATCCTCGATTTTCGCACGCTCCGGCGGGGCTCACCACCGGCGAGCACACTCGGAGGTGAGTTTCCGGCTTCCGGACGACATGATGGACCTGTCACCGTCGGATCCGTTTGCCGGCGGGTCGTCGACGGCGAGCATGGAGGAGATCGGATCCGAGGATGACCTGTTCTCAACGTACATTGACGTGGACAAGCTGGGAGGTGCAAACGGGTCGGGCGCTGGGGGAAACGGAGCGGATCCGACCGGAGAACGAGAGAAGAGTCCGGCGAGGGCGCGGCACCGGCACAGTAGTTCTGTCGATGACTCTTCGTTCGGCGAAATTATGGAAGCGAAGAAGGCTATGCCTCCTGATAAGTTAGCTGAGCTATGGACAGTTGATCCCAAGCGTGCTAAGAGAATACTTGCAAATCGGCAATCTGCTGCACGATCCAAAGAGAGAAAAGCTCGCTATATACAAGAACTCGAGCGTAAGGTTCAAACACTTCAGACGGAAGCCACAACTCTTTCTGCCCAATTGACATTATACCAGAGGGACACAACAGGCCTGAGTACTGAGAATACAGAGCTTAAGCTTCGTCTGCAAGCCATGGAACAGCAGGCACAGCTTCGTGATGCTCTTAATGAAGCATTGAAAAAGGAAGTTGAGAGACTTAAACTTGCTACTGGTGAGATGATGAGCCACACTGAATCCTTTAATTTGGGAATGCACCATATTCCGTTTACAGGATCAACTTTCAGTCCAATCCTGTCACAATCAGGTCCTTCTGGTCACCAGAACATCCACTTATCATTTGGTCACTCCCCGTCCACAATGCCAACTCATCAACTGCATCAAACAAGTTCTCATCCACTATCAGAAATATTGCAAAATGACCAGCTCGGTCGTTTCCAGGGGCTTGACATTAGTAGCAAAGGATCAACTGTGGTGAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGAGAGTAGCACGACATTTTGA 1098 0.5191 MQDPSSNPNSNPNPNPHNANAASQPPRPSPSTAATAAGASSSSIFARSGGAHHRRAHSEVSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGGANGSGAGGNGADPTGEREKSPARARHRHSSSVDDSSFGEIMEAKKAMPPDKLAELWTVDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKLATGEMMSHTESFNLGMHHIPFTGSTFSPILSQSGPSGHQNIHLSFGHSPSTMPTHQLHQTSSHPLSEILQNDQLGRFQGLDISSKGSTVVKSEGPSLSASESSTTF* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03299 365 MobiDBLite consensus disorder prediction 123 145 - -
Phac8g03299 365 MobiDBLite consensus disorder prediction 345 365 - -
Phac8g03299 365 MobiDBLite consensus disorder prediction 1 47 - -
Phac8g03299 365 MobiDBLite consensus disorder prediction 1 145 - -
Phac8g03299 365 Coils Coil 232 263 - -
Phac8g03299 365 CDD bZIP_plant_RF2 169 218 IPR044759 GO:0003700|GO:0006355
Phac8g03299 365 FunFam probable transcription factor PosF21 167 220 - -
Phac8g03299 365 MobiDBLite consensus disorder prediction 290 322 - -
Phac8g03299 365 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 166 229 IPR004827 GO:0003700|GO:0006355
Phac8g03299 365 Pfam bZIP transcription factor 168 223 IPR004827 GO:0003700|GO:0006355
Phac8g03299 365 Coils Coil 184 211 - -
Phac8g03299 365 Gene3D - 167 219 - -
Phac8g03299 365 SMART brlzneu 164 228 IPR004827 GO:0003700|GO:0006355
Phac8g03299 365 SUPERFAMILY Leucine zipper domain 168 219 IPR046347 GO:0003700|GO:0006355
Phac8g03299 365 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 11 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03299 Phac-Chr8 41226641 41229785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03299 1 365 bZIP Transcription Factor Family AT2G40620 50.485 7.50e-106 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac8g03299 bZIP_1 5.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03299 - - vra:106763153 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g03299 8 41226641 41229785 Phac8g03299 8 41226641 41229785 ECH
Phac6g01082 6 14673081 14676833 Phac8g03299 8 41226641 41229785 PCT