Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03296 ATGGAGGTCGAGGTTTGCATGAACGGTGCGTGCAAGAATGGCTACGCGAGAGAGTGGAAGAAAGGGTGGCCTCTGCGATCGGGTGGATTCGCCAGGCTCTGCGATAAGTGCGGATCTGCATATGCCAATTCAATTTTCTGTGAAAAATTCCACCTGCATCAAACTGGTTGGAGAGAGTGCGATTTTTGCAACAAGTCTATCCACTGTGGATGCATAATATCAAGGTTTTCTTTTGAGTACCTTGATTTTGGAGGTATACGTTGCTCAACCTGTCTGAAGGCTTCTCAACTTCCTCTGATACAGGAGACTGGAAACTCTATCAGGCCTATTAGATCAGTAAAAAATCATGCAAGTGATCGTCATGCTGAACATATTGATGATAGACTATTCCTCGATGGTTGTAGCAAAAGAAAACTTATGCACATGCGAAGCATTGTTGATGGTAGAGAATCCAGCCGGTGGCCTCAAGCTAAGAGAGATGACATAGATTCATGTATTGATCTAAACAGGGAAGACATGAGATTTTCAAATGTGATGAAACCGAGTAATCATTCATTAAAATTTACTACATTAGAAAATAATAGACCATCATGGGAGAGTAGAAGTATGCACAGATCAAGTTCATTGAATATTTCTCTGGGAGATTCATCAGGAAACTCTGTGCTACCTTCTGCTTTAGAGATTGTAGAACGGAGATTTGAGAGTAAAACATCATCTTCTTCCTTTCATCAAGGGCAAAGATCTCTCTCCATGATGCCTAAACCATTGATGAATGCAATAACCATAAATATGGAAACAAGCAATGGCATGATTTCTCAGGAGCGTGTTGCACGGCCACCTACTGATGGAAAAGGCAAGAATATGTTACTTTCTCGATACTGGCCTCGGATTACTGATCAAGAGCTTCAGCAATTGTCCGGAGATTTGAAGTCTAGTATAGTGCCTTTATTTGAGAAGGTACTGAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTCCCAAAATCTTGCGCTGAGGCCTACTTTCCTCCTATTTCACAATCAGAAGGTCTTCCTTTGCATATGAAAGATGTGAAGGGAAATGAGTGGACATTTCAGTTTAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTAGAGGGAGTAACCCCTTGCATACAGGCCTTGCAATTAAATGCAGGCGACATTGTGATATTTAGTCGGATAGATCCTGGAGGCAAATTTGTTTTGGGTTTTAGAAGGGCATCAGATTCTATAGATTCACAGGTTGATGGCTCTGCTGCACATTCCAATGTTTTTTCAACAAAGGAAACAACCTTTTCTGGTGCAACTGCAAATATGCACCCAGGAAATAGTTATCATGATCTACTCCAGACAAGGAAAGGGAATGGTGATCCTTACTTAAATAGATGTTCAGAGCATTTCCGTTTGGGTACTGGAATTGCTGATTGTCTTCGAACTGAAAATTTTGAGATGGTAAACAACGATTTGGTGCAACTTCCAATTTCAGTTTCAGAGAAGACTCAAAATATTGGGCCTGTGTGTAAGAGGTTGCTCGTACATAATGAAGATGCCATGGAGTTGAGAGTTACATGGGAAGAAGCTCAGGGCTTGCTTTGTCCGGCGCCCAGTGTGAAGTCCAGTATTGTAACAATTGAGGACCAAGAATTTGAGGAATATGAGGAACCCCCAGTCTTTGGAAAGAGAACTGTAATAAATGCTCGTTCATCAGGGTCTTTGAGCTTTGCATCAGAGGAAACGAGTCAACAGGAATTAGATAATATTCTGGTAACAAGTAAAGATTCAAAAAAGCGAAGAATTATGGAAAAAGCCAAGTCAATTATAGAACATGAGGCTTTCGGCTTGAATGAAGAAGCGAGTGCAGGAGTTTTGGATGATGATCTTGCTGAGCCTGGTGACTCATCAGGTGGAGCCACCATGAAACATCCAAGGCACCGTTCTGGATGCATTTGCATTGTGTGCATTCGACCTCCAAGTGGAAAAGGGAGACACAGAGCAACATGCACTTGCCCTGCATGCATCACTGTGAAACGCCGTTTGGACAGCCTTATGACGCGTAAGCAGCAATGGCAATCAGAAGGTGAAGCAGATGGTAGCCAGAAAGATGATATTTATGAGGAGGGTGAACTCAGTGCAGGACAAATAGACCTGAATTGTCGTCCCAATCATGATGAATAG 2205 0.4222 MEVEVCMNGACKNGYAREWKKGWPLRSGGFARLCDKCGSAYANSIFCEKFHLHQTGWRECDFCNKSIHCGCIISRFSFEYLDFGGIRCSTCLKASQLPLIQETGNSIRPIRSVKNHASDRHAEHIDDRLFLDGCSKRKLMHMRSIVDGRESSRWPQAKRDDIDSCIDLNREDMRFSNVMKPSNHSLKFTTLENNRPSWESRSMHRSSSLNISLGDSSGNSVLPSALEIVERRFESKTSSSSFHQGQRSLSMMPKPLMNAITINMETSNGMISQERVARPPTDGKGKNMLLSRYWPRITDQELQQLSGDLKSSIVPLFEKVLSASDAGRIGRLVLPKSCAEAYFPPISQSEGLPLHMKDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQALQLNAGDIVIFSRIDPGGKFVLGFRRASDSIDSQVDGSAAHSNVFSTKETTFSGATANMHPGNSYHDLLQTRKGNGDPYLNRCSEHFRLGTGIADCLRTENFEMVNNDLVQLPISVSEKTQNIGPVCKRLLVHNEDAMELRVTWEEAQGLLCPAPSVKSSIVTIEDQEFEEYEEPPVFGKRTVINARSSGSLSFASEETSQQELDNILVTSKDSKKRRIMEKAKSIIEHEAFGLNEEASAGVLDDDLAEPGDSSGGATMKHPRHRSGCICIVCIRPPSGKGRHRATCTCPACITVKRRLDSLMTRKQQWQSEGEADGSQKDDIYEEGELSAGQIDLNCRPNHDE* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03296 734 Pfam B3 DNA binding domain 317 417 IPR003340 GO:0003677
Phac8g03296 734 SMART B3_2 317 418 IPR003340 GO:0003677
Phac8g03296 734 MobiDBLite consensus disorder prediction 694 734 - -
Phac8g03296 734 ProSiteProfiles B3 DNA-binding domain profile. 317 418 IPR003340 GO:0003677
Phac8g03296 734 SUPERFAMILY DNA-binding pseudobarrel domain 314 416 IPR015300 -
Phac8g03296 734 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 734 - -
Phac8g03296 734 Gene3D - 295 422 IPR015300 -
Phac8g03296 734 FunFam B3 domain-containing transcription repressor VAL1 295 422 - -
Phac8g03296 734 CDD B3_DNA 315 416 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03296 Phac-Chr8 41205086 41211897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03296 3 730 B3 DNA Binding Superfamily AT4G32010 41.858 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac8g03296 B3 4.1e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03296 K09287 - vra:106763363 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g03296 8 41205086 41211897 Phac8g03296 8 41205086 41211897 ECH
Phac6g01094 6 14830276 14837749 Phac8g03296 8 41205086 41211897 PCT