Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03295 ATGGAGGTCGAGGTTTGCATGAACGGTGCGTGCAAGAATGGCTACGCGAGAGAGTGGAAGAAAGGGTGGCCTCTGCGATCGGGTGGATTCGCCAGGCTCTGCGATAAGTGCGGATCTGCATATGCCAATTCAATTTTCTGTGAAAAATTCCACCTGCATCAAACTGGTTGGAGAGAGTGCGATTTTTGCAACAAGTCTATCCACTGTGGATGCATAATATCAAGGTTTTCTTTTGAGTACCTTGATTTTGGAGGTATACGTTGCTCAACCTGTCTGAAGGCTTCTCAACTTCCTCTGGTAAGGTTAATCTTGATACAGGAGACTGGAAACTCTATCAGGCCTATTAGATCAGTAAAAAATCATGCAAGTGATCGTCATGCTGAACATATTGATGATAGACTATTCCTCGATGGTTGTAGCAAAAGAAAACTTATGCACATGCGAAGCATTGTTGATGGTAGAGAATCCAGCCGGTGGCCTCAAGCTAAGAGAGATGACATAGATTCATGTATTGATCTAAACAGGGAAGACATGAGATTTTCAAATGTGATGAAACCGAGTAATCATTCATTAAAATTTACTACATTAGAAAATAATAGACCATCATGGGAGAGTAGAAGTATGCACAGATCAAGTTCATTGAATATTTCTCTGGGAGATTCATCAGGAAACTCTGTGCTACCTTCTGCTTTAGAGATTGTAGAACGGAGATTTGAGAGTAAAACATCATCTTCTTCCTTTCATCAAGGGCAAAGATCTCTCTCCATGATGCCTAAACCATTGATGAATGCAATAACCATAAATATGGAAACAAGCAATGGCATGATTTCTCAGGAGCGTGTTGCACGGCCACCTACTGATGGAAAAGGCAAGAATATGTTACTTTCTCGATACTGGCCTCGGATTACTGATCAAGAGCTTCAGCAATTGTCCGGAGATTTGAAGTCTAGTATAGTGCCTTTATTTGAGAAGGTACTGAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTCCCAAAATCTTGCGCTGAGGCCTACTTTCCTCCTATTTCACAATCAGAAGGTCTTCCTTTGCATATGAAAGATGTGAAGGGAAATGAGTGGACATTTCAGTTTAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTAGAGGGAGTAACCCCTTGCATACAGGCCTTGCAATTAAATGCAGGCGACATTGTGATATTTAGTCGGATAGATCCTGGAGGCAAATTTGTTTTGGGTTTTAGAAGGGCATCAGATTCTATAGATTCACAGGTTGATGGCTCTGCTGCACATTCCAATGTTTTTTCAACAAAGGAAACAACCTTTTCTGGTGCAACTGCAAATATGCACCCAGGAAATAGTTATCATGATCTACTCCAGACAAGGAAAGGGAATGGTGATCCTTACTTAAATAGATGTTCAGAGCATTTCCGTTTGGGTACTGGAATTGCTGATTGTCTTCGAACTGAAAATTTTGAGATGGTAAACAACGATTTGGTGCAACTTCCAATTTCAGTTTCAGAGAAGACTCAAAATATTGGGCCTGTGTGTAAGAGGTTGCTCGTACATAATGAAGATGCCATGGAGTTGAGAGTTACATGGGAAGAAGCTCAGGGCTTGCTTTGTCCGGCGCCCAGTGTGAAGTCCAGTATTGTAACAATTGAGGACCAAGAATTTGAGGAATATGAGGAACCCCCAGTCTTTGGAAAGAGAACTGTAATAAATGCTCGTTCATCAGGGTCTTTGAGCTTTGCATCAGAGGAAACGAGTCAACAGGAATTAGATAATATTCTGGTAACAAGTAAAGATTCAAAAAAGCGAAGAATTATGGAAAAAGCCAAGTCAATTATAGAACATGAGGCTTTCGGCTTGAATGAAGAAGCGAGTGCAGGAGTTTTGGATGATGATCTTGCTGAGCCTGGTGACTCATCAGGTGGAGCCACCATGAAACATCCAAGGCACCGTTCTGGATGCATTTGCATTGTGTGCATTCGACCTCCAAGTGGAAAAGGGAGACACAGAGCAACATGCACTTGCCCTGCATGCATCACTGTGAAACGCCGTTTGGACAGCCTTATGACGCGTAAGCAGCAATGGCAATCAGAAGGTGAAGCAGATGGTAGCCAGAAAGATGATATTTATGAGGAGGGTGAACTCAGTGCAGGACAAATAGACCTGAATTGTCGTCCCAATCATGATGAATAG 2220 0.4216 MEVEVCMNGACKNGYAREWKKGWPLRSGGFARLCDKCGSAYANSIFCEKFHLHQTGWRECDFCNKSIHCGCIISRFSFEYLDFGGIRCSTCLKASQLPLVRLILIQETGNSIRPIRSVKNHASDRHAEHIDDRLFLDGCSKRKLMHMRSIVDGRESSRWPQAKRDDIDSCIDLNREDMRFSNVMKPSNHSLKFTTLENNRPSWESRSMHRSSSLNISLGDSSGNSVLPSALEIVERRFESKTSSSSFHQGQRSLSMMPKPLMNAITINMETSNGMISQERVARPPTDGKGKNMLLSRYWPRITDQELQQLSGDLKSSIVPLFEKVLSASDAGRIGRLVLPKSCAEAYFPPISQSEGLPLHMKDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQALQLNAGDIVIFSRIDPGGKFVLGFRRASDSIDSQVDGSAAHSNVFSTKETTFSGATANMHPGNSYHDLLQTRKGNGDPYLNRCSEHFRLGTGIADCLRTENFEMVNNDLVQLPISVSEKTQNIGPVCKRLLVHNEDAMELRVTWEEAQGLLCPAPSVKSSIVTIEDQEFEEYEEPPVFGKRTVINARSSGSLSFASEETSQQELDNILVTSKDSKKRRIMEKAKSIIEHEAFGLNEEASAGVLDDDLAEPGDSSGGATMKHPRHRSGCICIVCIRPPSGKGRHRATCTCPACITVKRRLDSLMTRKQQWQSEGEADGSQKDDIYEEGELSAGQIDLNCRPNHDE* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03295 739 Pfam B3 DNA binding domain 322 422 IPR003340 GO:0003677
Phac8g03295 739 CDD B3_DNA 320 421 IPR003340 GO:0003677
Phac8g03295 739 Gene3D - 300 427 IPR015300 -
Phac8g03295 739 ProSiteProfiles B3 DNA-binding domain profile. 322 423 IPR003340 GO:0003677
Phac8g03295 739 FunFam B3 domain-containing transcription repressor VAL1 300 427 - -
Phac8g03295 739 SMART B3_2 322 423 IPR003340 GO:0003677
Phac8g03295 739 SUPERFAMILY DNA-binding pseudobarrel domain 319 421 IPR015300 -
Phac8g03295 739 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 739 - -
Phac8g03295 739 MobiDBLite consensus disorder prediction 699 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03295 Phac-Chr8 41205086 41211897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03295 3 735 B3 DNA Binding Superfamily AT4G32010 41.593 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac8g03295 B3 4.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03295 K09287 - vra:106763363 1155.97