Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03272 ATGGCAGATATTACTTCAAATTCAAGTGTCAATATCTCATACCTTATCACCAAAAAACTCTCCATGAAGTTCTACTTCCCTCGAGTGCATCCTTTCCTTTTCATAATTGTTATTCTCTGTCCTATGGTTTTTGCTGACTTAAGTTCTGACAAGCAAGCCCTTCTTGATTTTGCTGCCGCTGTTCCCCATCGCCGTGACCTTAAGTGGAATCCAGCTACTTCAATCTGTACATCGTGGGTAGGAGTCACATGCAATCCGAATGGCACCCGTGTTGTTTCTGTCCGGCTTCCTGGAATTGGACTAGTCGGCACCATTCCGGCCAATACACTTGGCAAGATTGACTCACTCAAAAATATCAGCCTCCGTGCCAACCTACTCAGTGGAAGTCTTCCTCCTGATATTTCTTCTCTTCCTTCCCTAGAATATCTTTACCTCCAGCATAATAACCTTTCTGGTAACATACCTACCTCATTGTCCACCCACCTCAATGTACTTGATTTGTCATACAATTCCTTCACCGGTGCTATTCCAAAGACATTACAAAACTTAACACAACTAACTAGGTTGAACCTCCAGAACAACTCCCTATCTGGTGAGATACCAAATCTCAATGTCACTAAGCTCAGGCACTTGAATTTAAGCTACAACCATTTGAATGGCTCTATCCCTGCTGCCCTTCAGACTTTCCCCAATTCTTCCTTTGAGGGCAACTCTCTATGTGGATTACCTCTAAAGTCATGCTCTTTAGTCCCCCCTGCACCTTCTCCATTAAGTCCTTCCCCACCAAGTCCTTCAAGACATAGCTCCAAAAGTAAATTGAGTAAGGCTGCTATCATTGCAATTGCAGTTGGTGGGGGTGTGCTATTATTACTTTTAGTAGCTCTCATCATTTTTCTGTGCTGTTTAAAGAAAAAGAATGACGGAAGCCCCAGAGCTACTAAAGGCAAGGGTCCTAGTGGTGGGAGAAGTGAGAAGCCAAAAGAAGAGTTTGGAAGTGGGGTGCAAGAACCTGAGAAAAACAAGTTGGTTTTCTTTGAGGGCAGTTCTTATAATTTTGATCTAGAGGATTTGCTGAGAGCTTCGGCTGAAGTTCTTGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAAGAGTCGACAACAGTTGTAGTGAAAAGGTTGAAGGAAGTTGTTGTAGGCAAAAGAGAATTTGAACAGCAGATGGAGATTGTGAGGAGAGTTGGACAGCACCCTAATGTTGTGCCACTTCGTGCTTACTATTATTCCAAGGATGAGAAGCTTTTGGTTTATGACTACATCCCAAATGGCAATCTATCAACCCTCTTGCATGGTATGCATTTCTTTTTCTCTTTATTTCAGTTAAAACTTCTAAACTTGTTTTAG 1389 0.4226 MADITSNSSVNISYLITKKLSMKFYFPRVHPFLFIIVILCPMVFADLSSDKQALLDFAAAVPHRRDLKWNPATSICTSWVGVTCNPNGTRVVSVRLPGIGLVGTIPANTLGKIDSLKNISLRANLLSGSLPPDISSLPSLEYLYLQHNNLSGNIPTSLSTHLNVLDLSYNSFTGAIPKTLQNLTQLTRLNLQNNSLSGEIPNLNVTKLRHLNLSYNHLNGSIPAALQTFPNSSFEGNSLCGLPLKSCSLVPPAPSPLSPSPPSPSRHSSKSKLSKAAIIAIAVGGGVLLLLLVALIIFLCCLKKKNDGSPRATKGKGPSGGRSEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVRRVGQHPNVVPLRAYYYSKDEKLLVYDYIPNGNLSTLLHGMHFFFSLFQLKLLNLF* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03272 462 MobiDBLite consensus disorder prediction 308 335 - -
Phac8g03272 462 FunFam Leucine-rich repeat receptor-like protein kinase 49 159 - -
Phac8g03272 462 ProSiteProfiles Leucine-rich repeat profile. 185 207 IPR001611 GO:0005515
Phac8g03272 462 Gene3D Ribonuclease Inhibitor 49 160 IPR032675 -
Phac8g03272 462 Gene3D Phosphorylase Kinase; domain 1 327 434 - -
Phac8g03272 462 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Phac8g03272 462 SUPERFAMILY L domain-like 61 232 - -
Phac8g03272 462 Gene3D Ribonuclease Inhibitor 161 250 IPR032675 -
Phac8g03272 462 ProSiteProfiles Protein kinase domain profile. 359 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03272 462 FunFam pollen receptor-like kinase 1 327 434 - -
Phac8g03272 462 SUPERFAMILY Protein kinase-like (PK-like) 363 450 IPR011009 -
Phac8g03272 462 PANTHER OS05G0588300 PROTEIN 32 446 - -
Phac8g03272 462 MobiDBLite consensus disorder prediction 318 335 - -
Phac8g03272 462 FunFam Leucine-rich repeat receptor-like protein kinase 160 247 - -
Phac8g03272 462 Pfam Leucine Rich Repeat 207 228 IPR001611 GO:0005515
Phac8g03272 462 Pfam Leucine Rich Repeat 162 183 IPR001611 GO:0005515
Phac8g03272 462 Pfam Protein kinase domain 362 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03272 462 ProSitePatterns Protein kinases ATP-binding region signature. 365 396 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03272 Phac-Chr8 40983912 40989746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03272 32 446 Receptor kinase-like Gene Family AT5G58300 66.271 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac8g03272 Pkinase 1.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03272 - - gmx:100818344 674.085