Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03265 ATGGCCTTGGCTACAAACAATTTTAGTGAGTCTGCTCAAATTGGAGAAGGGGGCTATGGGAAGGTTTATAAAGGTCGTATTTCTGATGGCACTGTTGTTGCCATAAAACGTGCACAAGAGAGTTCATTACAAGGTGAGAGGGAGTTCCTTACAGAAATAGAATTGCTATCAAGGCTACACCATCCCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGATGTTAGTCTATGA 237 0.4219 MALATNNFSESAQIGEGGYGKVYKGRISDGTVVAIKRAQESSLQGEREFLTEIELLSRLHHPNLVSLIGYCDEEDVSL* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03265 78 SUPERFAMILY Protein kinase-like (PK-like) 3 75 IPR011009 -
Phac8g03265 78 MobiDBLite consensus disorder prediction 1 20 - -
Phac8g03265 78 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 75 - -
Phac8g03265 78 ProSiteProfiles Protein kinase domain profile. 8 78 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03265 78 FunFam receptor-like protein kinase FERONIA 1 78 - -
Phac8g03265 78 Pfam Protein kinase domain 9 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03265 78 ProSitePatterns Protein kinases ATP-binding region signature. 14 36 IPR017441 GO:0005524
Phac8g03265 78 Gene3D Phosphorylase Kinase; domain 1 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03265 Phac-Chr8 40897548 40899942 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03265 1 74 Receptor kinase-like Gene Family AT5G01950 74.324 2.50e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Phac8g03265 Pkinase 6.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03265 - - pvu:PHAVU_008G2448000 140.969