Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03260 ATGGAGGACTTTTTTCTTTCTATCGTAGCAAAGATTGCAGAATATGCAATATTTCCAATTTTAGATCATTTGCAATACTTATGTTGTTTCCACAACTTTGCTTTGAATCTTTCAAATGCCAAAGAACAATTAGAATTGACTCGAGAGAGTGTGAATGAGCGAATTAGAGAAGCCATTAAAAGGACTGAAAAAGTTGAACCAGCTGTTGAGAAGTGGCTAAAAGATGTTGAGAAAGTCTTAAATGAAGTACAACTACTGGAAGAAAGAATATTGAATGTAAACAATAGCTATTTCAGAAGGCAATGTCAATATTCTTTTGCAAAAGAAATAGCAAGAAAAGCAACTGAAATGATTCAGCTCGATCGTAATAGCATTATGTTCAAATCTACAAAAACACCGTACAACAAACTTCTAGAAGCATTACAGAATAAAAGTGTTTCCATGATTGGGTTAGTTGGATTAGGAGGCTCAGGGAAAACTACTTTGGCGAAAAAAGTGGGTAAAAAGGCTAAAGAGATGAAACTCTTTGAGAAGGTTGTTATGGCAACAGTGTCTCAACCACCAAATATCAGAAGTATCCAAGATCAAATTGTTGACCAATTGAGTTTCAAGTTAAATGAAGCATCAGATATAGGTAGAGCACAAAGACTATCACAAAGATTAAGGGAAGGTACAACTCTTTTAATCTTGGATGATGTATGGGAAAAGCTAAACTTTGAAGCTTTAGGTATTCCATTTGATGAAAATGGTAAGGCTTGTTGCGTACTCCTAACAACTCGAAATAGGGAAATATGCAATTTTATGCAATGCCAAAGTATAATTGAACTTGATCTCTTAACTGACGATGAAGCATGGATTTTGTTCAGAAAATATGCAAATATAACTGATGTCTCCTCAGAAGCTTTGAAAGAAGGTGTGGCAAGAAAAATTATTAATGAATGTAAGGGATTGCCCATTGCAATTGTGACGGTTGCAAGCACGCTAAAAGGGAAAACTATTGAAGATTTTGAGTTAGCATTGTCAAGGCTAGAAAATTCCAAGCCACTAGATGTTCCAAAAGGCTTAATAAGTCCTTATGTTTGTCTTGAATTTAGTTACAATAATTTGACAAACCAAATGGCTCAATCTTTATTGTTGTTGTGTTCTATGTTTCCAGAGGATTATGAAATAGATTTGGAAGATTTATTTCGATTTGGAAGAGGATTTTGCACAGTTGGGACGTTTGGAACAATGGAGAATGCAAGGAGAGAGATGCATGAAGCAATTGACATTCTTAAGAGTTGTTTTTTGTTAATGCAAGCCGGAACAAAAGAAAATGTAAAAATGCATGATTTGGTTCGTGATGTAGCCTTGTGGATTGCCGCTAAAAGTGGTCAAGCAATTTTCACACGTAATGAAGTGGGTCTGGGAGTGTTGACAAATGATGAAATCATGAAAGATACAAAAGCATTAGCCTTATGGAATATAAGAGCATATGACTCTCTTAATTATAAAATAAATTGTACAACACTTGAAATTCTCTTGCTTTGTTATAGTGGTGGCATGGATGTACCAGATGTGTGTTCTCAAAGCTTGGAAAAACTTAAAACCTTAATTATAAATTCATTAACAAAAGGCTATAGGTTTCTTTTGCCAGAGTCACTAAAGTCGTTAAAAAATCTTCGAACACTGTGCTTGAGAAATCATGATTTAGGTGACATATCTTTTGTGGAAAGACTGCAAGCACTTGAGGTTCTTGACTTGCGTGGCTCTTCTTTTGAAGAATTTCCTGTTGGGATTGTAGAATTAAAGAAGTTGAAGCTTCTAGATTTGTTCGAATGTCGGCTTGAGAAAAATATAGGTGATGAAGTTTACGAAGTTGTAATGAAATGTTTGCAGCTAGAGGAATTGTACTTGTACTTGGTCAATTACAAAAAGGACTTTTCACATGATGTCTCTTTCTCCAAATTACAGAGGTATGCTATAATAAACTATCATTCTTCTAGGTATTGGGATGTCCCAACCCTGAAGAAATATGCAGAGTCTAGGGGTTTATTAATACATGATTTTGATGTTACTGTTCAAAATTTTATATCATTACCAATCAAGGATCTCTTTATAAGAGCAGAATTCCTTTATTTGAGGAACCTTGGGGGAGATTTTAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCACTTGATTACCCTAAAACTCAAATTGTGTGAAAAGATAGAATGTCTCATTGATAACACTATGAATACCACCAACAACAACAGTGTATTCTCTAAACTTGTTTACTTAAGTTTGGAAAGGTTATGTAGCCTTCGGCAAGTTTGGAAAGGTTATTTAGGAAAGCTCTTGATAGAAGATTGTAGTAAATTGAGCAATATATCCTTTCCAAGGAAGTCTAAGCTATGCAATTTGAAGGTCCTCTCAATATCTGATTGCCCTGTGCTAACTTCTCTCTTCGTGCCATCCATTGTCCAATCTCTAGTGTTGTTAGAGGAACTAATAGTATCTTCCTGCAACGCATTGAGGCACATAATAGATGATGTGGAAGAAGAGAACGATGTTCTTTCAAGCACCCCAAGTCCTTCATATTTGACGCTCCAAAAATTAAAGATTATTGAAATTAAAGAATGCAACAATTTAGAGTACATATTCTCTGAGAATTTAGCCGTAGGGCTAGTGAGTTTGGAAAGTGTGGAAATTCGATATTGCTTTGAATTGAAGTATGTATTTAGAAGTGAAAAGAAACGTAATCCTGCAATTTACCCAAGTGAAAAGGAGACTAATATCATAAATTTTCCAAATTTGCATACTTTATGTTTGACAGATTTACCAAATGTGATTGACATTTGGCCTCAATATTGTTGTCCACATCTTCCACATCTTAAAGACATATATTGTATTAAAGTTCCCAAATTGCTTAACTCTTTCATAAGTAAGATGATGACTGCTTCAAATCTTCCGCAAGAAACAACTTCAAAGGAGAATGAAATAGCATGGTTGATTACCAACACATTCAACCAATTGGGTTCTCTATTGTTTCCACTCCAACTTGAAAGGCTTTGGTTGTCTGATGTTAGAGTAAAAGGTCTCTTCCAAATCCAAATGGGAGAAGAAGGGGGCACTGGAGAACTTCTTCCTCTAAACTTGGATATAACTTCTCTATCCTTGAGGAACCTACCTGAGCTCAACTTCATATGGAAGGGCCCCACAGGTTTTCTAAGCCTCCAAAAGCTTTACTATGTTGAAGTGAATGGATGTCCAAAATTGAAAACCATCTTCTCCATCACTATTGTTACAAGTTTACCAATGCTGGAAAATCTGGATATAAATAACTGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCACAACAACTCCAAACCCTGTATTCTTCCCAACAACTCTGCTTCCCAAAACTCTATTCCATTACAGTTAAAGGGTGCAATAAGTTAAAATGTCTTTTTTATAATCTATCGGCTAGTCATTTTCCCAGTCTGGAACATTTGCAAATAGAAGAGTGTTCTCAGTTACACAAGACTTTTGGTTTTGAACATGAAGCTAATGATGGTGGTGAAGAAGAGACGGGTAAAAAGGGAGAACAAGTACTACTACAGAAACTGACAACAATAACACTCAACAATTTGCCAAACTTCGAAGAGATTCACCACGGATTTAAGTTTAAAGAAGATGTTTATCATATCGTGGAAGAATGTCCTAAGTATTGTCCAAGTTTATATCTACATCCAGATATGTAA 3759 0.3525 MEDFFLSIVAKIAEYAIFPILDHLQYLCCFHNFALNLSNAKEQLELTRESVNERIREAIKRTEKVEPAVEKWLKDVEKVLNEVQLLEERILNVNNSYFRRQCQYSFAKEIARKATEMIQLDRNSIMFKSTKTPYNKLLEALQNKSVSMIGLVGLGGSGKTTLAKKVGKKAKEMKLFEKVVMATVSQPPNIRSIQDQIVDQLSFKLNEASDIGRAQRLSQRLREGTTLLILDDVWEKLNFEALGIPFDENGKACCVLLTTRNREICNFMQCQSIIELDLLTDDEAWILFRKYANITDVSSEALKEGVARKIINECKGLPIAIVTVASTLKGKTIEDFELALSRLENSKPLDVPKGLISPYVCLEFSYNNLTNQMAQSLLLLCSMFPEDYEIDLEDLFRFGRGFCTVGTFGTMENARREMHEAIDILKSCFLLMQAGTKENVKMHDLVRDVALWIAAKSGQAIFTRNEVGLGVLTNDEIMKDTKALALWNIRAYDSLNYKINCTTLEILLLCYSGGMDVPDVCSQSLEKLKTLIINSLTKGYRFLLPESLKSLKNLRTLCLRNHDLGDISFVERLQALEVLDLRGSSFEEFPVGIVELKKLKLLDLFECRLEKNIGDEVYEVVMKCLQLEELYLYLVNYKKDFSHDVSFSKLQRYAIINYHSSRYWDVPTLKKYAESRGLLIHDFDVTVQNFISLPIKDLFIRAEFLYLRNLGGDFKNIIPSMDPQGMNHLITLKLKLCEKIECLIDNTMNTTNNNSVFSKLVYLSLERLCSLRQVWKGYLGKLLIEDCSKLSNISFPRKSKLCNLKVLSISDCPVLTSLFVPSIVQSLVLLEELIVSSCNALRHIIDDVEEENDVLSSTPSPSYLTLQKLKIIEIKECNNLEYIFSENLAVGLVSLESVEIRYCFELKYVFRSEKKRNPAIYPSEKETNIINFPNLHTLCLTDLPNVIDIWPQYCCPHLPHLKDIYCIKVPKLLNSFISKMMTASNLPQETTSKENEIAWLITNTFNQLGSLLFPLQLERLWLSDVRVKGLFQIQMGEEGGTGELLPLNLDITSLSLRNLPELNFIWKGPTGFLSLQKLYYVEVNGCPKLKTIFSITIVTSLPMLENLDINNCDELEQIFDLGDAQQLQTLYSSQQLCFPKLYSITVKGCNKLKCLFYNLSASHFPSLEHLQIEECSQLHKTFGFEHEANDGGEEETGKKGEQVLLQKLTTITLNNLPNFEEIHHGFKFKEDVYHIVEECPKYCPSLYLHPDM* 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03260 1252 Gene3D - 278 365 IPR042197 -
Phac8g03260 1252 PRINTS Disease resistance protein signature 314 328 - -
Phac8g03260 1252 PRINTS Disease resistance protein signature 864 880 - -
Phac8g03260 1252 PRINTS Disease resistance protein signature 220 234 - -
Phac8g03260 1252 PRINTS Disease resistance protein signature 148 163 - -
Phac8g03260 1252 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1051 1156 - -
Phac8g03260 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 378 IPR027417 -
Phac8g03260 1252 SUPERFAMILY RNI-like 1014 1179 - -
Phac8g03260 1252 Coils Coil 34 61 - -
Phac8g03260 1252 Gene3D - 366 451 IPR036388 -
Phac8g03260 1252 Gene3D Ribonuclease Inhibitor 699 917 IPR032675 -
Phac8g03260 1252 Gene3D Ribonuclease Inhibitor 470 673 IPR032675 -
Phac8g03260 1252 FunFam Probable disease resistance protein At1g61300 111 272 - -
Phac8g03260 1252 Gene3D Ribonuclease Inhibitor 918 1246 IPR032675 -
Phac8g03260 1252 Coils Coil 69 96 - -
Phac8g03260 1252 Gene3D - 109 275 IPR027417 -
Phac8g03260 1252 SUPERFAMILY L domain-like 441 971 - -
Phac8g03260 1252 Pfam NB-ARC domain 133 347 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03260 Phac-Chr8 40804855 40816590 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03260 134 467 WRKY Transcription Factor Family AT5G45050 23.907 3.11e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03260 - - pvu:PHAVU_008G244500g 1797.33