Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03255 ATGTATCTTTCAAAGGGTTGTAAGTGTGAAGAAGCTGTTCTGCTGTGCTTGTGTTTCTTCTGCTATTTTCTATTTGCTACTGCTTTGATCACTGATCCCACTGAAGTTGACGCATTAAGAACCATAAAGAGAAGCTTGATTGATACTAATGGAAATTTGAGCAACTGGAATCGTGGAGATCCTTGTACATCTAACTGGACAGGAGTCATGTGCTCGGATACAACGTTAGTCGATGGCTATCTACATGTTAGAGAACTGCATTTACTGAACATGAACTTGTCTGGAACTTTGGCACCAGAGATTGGCCGCTTATCTTATCTGGAAGTGTTGGACTTTATGTGGAATGACATAACTGGGAGCATACCGAAGGAAATTGGCTTTATCAATCCTTTGAAACTCTTACTCCTGAATGGAAATCAGTTAACAGGTGAGTTACCAGAAGAGCTTGGCTTTCTTCCATTCCTGATTCGATTCCAAATAGATCAGAACAATATCACAGGACCTATACCTTTATCATTTGCAAAACTGAACACCACTGTACATTTTCACATGAACAATAATTCACTTAGTGGGAAAATACCACCACAACTTTCCAGTTTAGGAAGCCTTCTTCACCTTCTTCTTGACAACAACAAATTGACAGGAGAACTTCCCTCTGAGCTCTCTGAGATGCCAAGCTTAAAGATTCTTCAACTTGATAACAACAACTTTGGTGGAAATAGCATTCCACATTCTTATGCAAACATGTCAAGATTGATAAAACTGAGTCTTAGGAACTGCAACTTGCAAGGACCGATTCCTGATTTGAGCACGATACCACGCCTAACTTATCTTGACCTCAGTTTCAATCAGTTCAATGAATCAATTCCAACTAATAAGCTTTCAGACAATATCACAACCATTGATTTGTCAAACAATGATCTTATTGGAACTATTCCATCTTACTTTTCTCGTCTTCCACGTCTTCAAAAGCTGTCAATTGCAAACAATTCATTGAACGGAAGTGTTCCTTCAACCATTTGGCAAGACAGGATTTTAAATGGATCAGAAATGCTTCACTTGGACATGCAAAGGAATCAATTTACAAGCATATCAGGCAGTACAAATCTTCCTCCAAATGTCACTCTCTGGCTAGAGGGAAATCCTATGTGCTCAAATAATAACACCTTAGCTCGGTTCTGTGGATCTGAAAGTGACAGTAGCATCAATGGAAACTTCAGTGTTAGCTGTCCCACCCAAGCATGCCCCCCTCCCTATGAATATGCAGTGGACTGTTTCTGTGCTGCCCCGTTGGTTGTTAATTATCGATTAAAAAGTCCAGGATTTTCAGATTTCCGCACGTACATGAATGCATTTCAGAGCATGATGTCAAGGGGTCTTAAAATACATATCATTCAGTTCCATATTAACAAATTTGAATGGGAAGAAGGTCCTCGGTTGGGAATGAACTTGAAGCTTTTTCCTATGTATGTTGATGATAACAGCTCTCATGTTTTCAATACAAGTGAGGTTCTTCGCCTCAGAAACTTGTTCTTAGACTTTGATCTTCCAACTAATGACTTGTTCGGACCTTTTGAGCTTCTAGACTTCATTCTCCTGGATCCTTACAGAGATGTGACTGTTACCTCTCCGAGTTCAGGGATCAGCAAAGGAGCACTGGCTGGAATAGTCTTAGGTGCAATTGCCTTTGTGGTTACTTTTTCTGCAATTGTTACCATTCTCGTATTGAGATTACGTTTGAGAGATACACCTTCCAAACGGACAAAAGCATCTAGGGTCTCAATAAAAATTGAAGGTATAAGATCATTTTATTACGAAGAAATGCAAGCCGCTACAAACAATTTTAGTGTCTCTGCTCGAATTGGACAAGGGGGGTATGGGAGGGTTTTTAAAGGTGTTCTTCCTGATGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGTTCCCTGCAAGGTGAGAAGGAGTTTCTTACAGAAATAGAGTTGCTATCAAGGCTACATCACCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATTTTGGTTTATGAATACATGCCAAATGGAACCCTAAAGGATCACCTTTCTGTTTATTCAGAAAAACCTCTTACTTTTTCCATGAGGTTGAAGATTGCTCTAGGGTCAGCTAAAGGTCTTGTGTATCTACACACGGAAGTAGATCCTCCAATATTCCACCGAGATGTCAAGGCCACCAATATATTATTGGACTCCAAGTTCACTGCAAAAGTTGCTGACTTTGGACTTTCACGACTTGCTCCAGTCCCAGATACACAAGGAAACGTGCCTGGTTATGTATCTACTGTGGTAATGGGAACCCCGGGTTATATTGATCCAGAGTACTTCTTAACTCACAAATTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTAGAACTTGTGACTGGGAGGCCACCAATCTTTCATGGCGAAAATATTATCAGACATGTTAGTATGGCATACGAATCTGGTGGATTGTTTTCAGTTATTGATAAACGTATTGGCTCTTATCCTTCAGAATATGTGGAGAAGTTTTTGACGTTGGCCTTAAAGTGTTGCAAAGATGCACCAGATGAGCGACCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAAAACATCTGTTCAATGTTACCCGAGACCAACGCCGTGGAAGCAGAACATGGGACAAGTGGTTCTGGAAGAATATTCAGTTCACAACCTTCATCATCTGCTACCAGGACTCCTTTTGTTTCAGAAGATGTGTCTGGTAGTGACCTTGTCAGTGGAAAGATGCCTACCATTAGGCCTAGATAA 2835 0.4067 MYLSKGCKCEEAVLLCLCFFCYFLFATALITDPTEVDALRTIKRSLIDTNGNLSNWNRGDPCTSNWTGVMCSDTTLVDGYLHVRELHLLNMNLSGTLAPEIGRLSYLEVLDFMWNDITGSIPKEIGFINPLKLLLLNGNQLTGELPEELGFLPFLIRFQIDQNNITGPIPLSFAKLNTTVHFHMNNNSLSGKIPPQLSSLGSLLHLLLDNNKLTGELPSELSEMPSLKILQLDNNNFGGNSIPHSYANMSRLIKLSLRNCNLQGPIPDLSTIPRLTYLDLSFNQFNESIPTNKLSDNITTIDLSNNDLIGTIPSYFSRLPRLQKLSIANNSLNGSVPSTIWQDRILNGSEMLHLDMQRNQFTSISGSTNLPPNVTLWLEGNPMCSNNNTLARFCGSESDSSINGNFSVSCPTQACPPPYEYAVDCFCAAPLVVNYRLKSPGFSDFRTYMNAFQSMMSRGLKIHIIQFHINKFEWEEGPRLGMNLKLFPMYVDDNSSHVFNTSEVLRLRNLFLDFDLPTNDLFGPFELLDFILLDPYRDVTVTSPSSGISKGALAGIVLGAIAFVVTFSAIVTILVLRLRLRDTPSKRTKASRVSIKIEGIRSFYYEEMQAATNNFSVSARIGQGGYGRVFKGVLPDGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLIGYCDEEGEQILVYEYMPNGTLKDHLSVYSEKPLTFSMRLKIALGSAKGLVYLHTEVDPPIFHRDVKATNILLDSKFTAKVADFGLSRLAPVPDTQGNVPGYVSTVVMGTPGYIDPEYFLTHKLTDKSDVYSLGVVFLELVTGRPPIFHGENIIRHVSMAYESGGLFSVIDKRIGSYPSEYVEKFLTLALKCCKDAPDERPKMAEVARELENICSMLPETNAVEAEHGTSGSGRIFSSQPSSSATRTPFVSEDVSGSDLVSGKMPTIRPR* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03255 944 SUPERFAMILY L domain-like 47 396 - -
Phac8g03255 944 Gene3D Ribonuclease Inhibitor 292 413 IPR032675 -
Phac8g03255 944 Pfam Protein kinase domain 616 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03255 944 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 691 900 - -
Phac8g03255 944 Gene3D Phosphorylase Kinase; domain 1 585 690 - -
Phac8g03255 944 PANTHER RECEPTOR-LIKE PROTEIN 55 42 887 - -
Phac8g03255 944 ProSiteProfiles Protein kinase domain profile. 615 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03255 944 MobiDBLite consensus disorder prediction 898 944 - -
Phac8g03255 944 FunFam Leucine-rich repeat protein kinase family protein 579 690 - -
Phac8g03255 944 Gene3D Transferase(Phosphotransferase) domain 1 691 903 - -
Phac8g03255 944 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Phac8g03255 944 SUPERFAMILY Protein kinase-like (PK-like) 600 896 IPR011009 -
Phac8g03255 944 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Phac8g03255 944 SMART serkin_6 615 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03255 944 Gene3D Ribonuclease Inhibitor 223 291 IPR032675 -
Phac8g03255 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Phac8g03255 944 CDD STKc_IRAK 621 887 - -
Phac8g03255 944 MobiDBLite consensus disorder prediction 899 928 - -
Phac8g03255 944 FunFam Predicted protein 173 394 - -
Phac8g03255 944 Gene3D Ribonuclease Inhibitor 34 152 IPR032675 -
Phac8g03255 944 Gene3D Ribonuclease Inhibitor 153 222 IPR032675 -
Phac8g03255 944 FunFam Leucine-rich repeat receptor-like kinase 34 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03255 Phac-Chr8 40772415 40785298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03255 11 893 Receptor kinase-like Gene Family AT5G01950 55.011 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Phac8g03255 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03255 - - gmx:100785752 1536.93