Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03254 ATGACTATATTTGAAGTATTTCATGGATCTTCTTGTTCTTGCAGTCAACTTGATAACAACAACTTTGGTGGAAATAGCATTCCACATTCTTATGCAAACATGTCAAGATTGATAAAACTGAGTCTTAGGAACTGCAACTTGCAAGGACCGATTCCTGATTTGAGCACGATACCACGCCTAACTTATCTTGACCTCAGTTTCAATCAGTTCAATGAATCAATTCCAACTAATAAGCTTTCAGACAATATCACAACCATTGATTTGTCAAACAATGATCTTATTGGAACTATTCCATCTTACTTTTCTCGTCTTCCACGTCTTCAAAAGCTGTCAATTGCAAACAATTCATTGAACGGAAGTGTTCCTTCAACCATTTGGCAAGACAGGATTTTAAATGGATCAGAAATGCTTCACTTGGACATGCAAAGGAATCAATTTACAAGCATATCAGGCAGTACAAATCTTCCTCCAAATGTCACTCTCTGGCTAGAGGGAAATCCTATGTGCTCAAATAATAACACCTTAGCTCGGTTCTGTGGATCTGAAAGTGACAGTAGCATCAATGGAAACTTCAGTGTTAGCTGTCCCACCCAAGCATGCCCCCCTCCCTATGAATATGCAGTGGACTGTTTCTGTGCTGCCCCGTTGGTTGTTAATTATCGATTAAAAAGTCCAGGATTTTCAGATTTCCGCACGTACATGAATGCATTTCAGAGCATGATGTCAAGGGGTCTTAAAATACATATCATTCAGTTCCATATTAACAAATTTGAATGGGAAGAAGGTCCTCGGTTGGGAATGAACTTGAAGCTTTTTCCTATGTATGTTGATGATAACAGCTCTCATGTTTTCAATACAAGTGAGGTTCTTCGCCTCAGAAACTTGTTCTTAGACTTTGATCTTCCAACTAATGACTTGTTCGGACCTTTTGAGCTTCTAGACTTCATTCTCCTGGATCCTTACAGAGATGTGACTGTTACCTCTCCGAGTTCAGGGATCAGCAAAGGAGCACTGGCTGGAATAGTCTTAGGTGCAATTGCCTTTGTGGTTACTTTTTCTGCAATTGTTACCATTCTCGTATTGAGATTACGTTTGAGAGATACACCTTCCAAACGGACAAAAGCATCTAGGGTCTCAATAAAAATTGAAGGTATAAGATCATTTTATTACGAAGAAATGCAAGCCGCTACAAACAATTTTAGTGTCTCTGCTCGAATTGGACAAGGGGGGTATGGGAGGGTTTTTAAAGGTGTTCTTCCTGATGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGTTCCCTGCAAGGTGAGAAGGAGTTTCTTACAGAAATAGAGTTGCTATCAAGGCTACATCACCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATTTTGGTTTATGAATACATGCCAAATGGAACCCTAAAGGATCACCTTTCTGTTTATTCAGAAAAACCTCTTACTTTTTCCATGAGGTTGAAGATTGCTCTAGGGTCAGCTAAAGGTCTTGTGTATCTACACACGGAAGTAGATCCTCCAATATTCCACCGAGATGTCAAGGCCACCAATATATTATTGGACTCCAAGTTCACTGCAAAAGTTGCTGACTTTGGACTTTCACGACTTGCTCCAGTCCCAGATACACAAGGAAACGTGCCTGGTTATGTATCTACTGTGGTAATGGGAACCCCGGGTTATATTGATCCAGAGTACTTCTTAACTCACAAATTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTAGAACTTGTGACTGGGAGGCCACCAATCTTTCATGGCGAAAATATTATCAGACATGTTAGTATGGCATACGAATCTGGTGGATTGTTTTCAGTTATTGATAAACGTATTGGCTCTTATCCTTCAGAATATGTGGAGAAGTTTTTGACGTTGGCCTTAAAGTGTTGCAAAGATGCACCAGATGAGCGACCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAAAACATCTGTTCAATGTTACCCGAGACCAACGCCGTGGAAGCAGAACATGGGACAAGTGGTTCTGGAAGAATATTCAGTTCACAACCTTCATCATCTGCTACCAGGACTCCTTTTGTTTCAGAAGATGTGTCTGGTAGTGACCTTGTCAGTGGAAAGATGCCTACCATTAGGCCTAGATAA 2190 0.4073 MTIFEVFHGSSCSCSQLDNNNFGGNSIPHSYANMSRLIKLSLRNCNLQGPIPDLSTIPRLTYLDLSFNQFNESIPTNKLSDNITTIDLSNNDLIGTIPSYFSRLPRLQKLSIANNSLNGSVPSTIWQDRILNGSEMLHLDMQRNQFTSISGSTNLPPNVTLWLEGNPMCSNNNTLARFCGSESDSSINGNFSVSCPTQACPPPYEYAVDCFCAAPLVVNYRLKSPGFSDFRTYMNAFQSMMSRGLKIHIIQFHINKFEWEEGPRLGMNLKLFPMYVDDNSSHVFNTSEVLRLRNLFLDFDLPTNDLFGPFELLDFILLDPYRDVTVTSPSSGISKGALAGIVLGAIAFVVTFSAIVTILVLRLRLRDTPSKRTKASRVSIKIEGIRSFYYEEMQAATNNFSVSARIGQGGYGRVFKGVLPDGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLIGYCDEEGEQILVYEYMPNGTLKDHLSVYSEKPLTFSMRLKIALGSAKGLVYLHTEVDPPIFHRDVKATNILLDSKFTAKVADFGLSRLAPVPDTQGNVPGYVSTVVMGTPGYIDPEYFLTHKLTDKSDVYSLGVVFLELVTGRPPIFHGENIIRHVSMAYESGGLFSVIDKRIGSYPSEYVEKFLTLALKCCKDAPDERPKMAEVARELENICSMLPETNAVEAEHGTSGSGRIFSSQPSSSATRTPFVSEDVSGSDLVSGKMPTIRPR* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03254 729 SUPERFAMILY L domain-like 17 196 - -
Phac8g03254 729 SMART serkin_6 400 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03254 729 MobiDBLite consensus disorder prediction 684 713 - -
Phac8g03254 729 ProSiteProfiles Protein kinase domain profile. 400 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03254 729 Pfam Protein kinase domain 401 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03254 729 PANTHER RECEPTOR-LIKE PROTEIN 55 16 672 - -
Phac8g03254 729 FunFam Leucine-rich repeat protein kinase family protein 364 475 - -
Phac8g03254 729 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 476 685 - -
Phac8g03254 729 Gene3D Ribonuclease Inhibitor 4 214 IPR032675 -
Phac8g03254 729 MobiDBLite consensus disorder prediction 683 729 - -
Phac8g03254 729 Gene3D Transferase(Phosphotransferase) domain 1 476 688 - -
Phac8g03254 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Phac8g03254 729 SUPERFAMILY Protein kinase-like (PK-like) 385 682 IPR011009 -
Phac8g03254 729 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Phac8g03254 729 Gene3D Phosphorylase Kinase; domain 1 370 475 - -
Phac8g03254 729 CDD STKc_IRAK 406 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03254 Phac-Chr8 40772415 40781656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03254 16 729 Receptor kinase-like Gene Family AT5G37450 48.452 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Phac8g03254 Pkinase 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03254 - - gmx:100785752 1175.23