Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03242 ATGCTTGCTGCTGCTGCTTCAGCTTCTCGAAACCTTATTCAACGCGATGCCAGCGTCGGTGCTTGCAGTGGCAGTGGCAATCGAGTTCGCTCTCTTTTTACAGTTTCTGTGATCGGCACAGCCTACCCCATTCGCACTAAAACATGTTACAGTAGTCATGGTTATGGAATCGGTTTCAATGTCCCAAAACAGAGAGCGTGCCCAGGTTTGCTTTTTGCTGTAAAGGGGTTCCTCTCGGATTCATCAAATTCTAATTCTCCACATGGCAGAGTTCCCAGACCTTACCTACCACACCCTAGTTCAAGTGTGGATGGGCGAGCATTGTTCTCAACTTCAACTAAAGATGATGGAAGCCAAAGCCAAAAACCTACTTCTTCGACCATTGCTAAACCCCCACCATCACTTCCTGATGGGCAAGTTGCTGATGTGAAGATCCTACGCACACTTGCCAGTTACCTTTGGATGAAAGATAATCTTGAATTTCGGGTTCGGATTATTGCTGCATTGGGCTTACTTGTTGGGGCTAAGGTTTTGAATGTTCAGGTCCCGTTCTTGTTCAAGCTTGCAGTTGATTCGTTGACGACTGCCTCGGGGAATGCTGCTGCTCTTGCTTCGAGTTCAAGTGGGATGGCTCTTTTTGCAACCCCAGTGGCGGTGTTGGTTGGATATGGGATTGCGCGTTCAGGAGCTGCTGCTTTCAATGAACTGCGGACTGCTATATTTTCTAAGGTTGCACTGCGAACTATTCGATTAGTATCAAGGAAGGTCTTCTCACATTTGCATGACCTTGACCTTCGGTATCATCTAAGCCGAGAAACTGGTGCATTAAGTAGAATAATTGATCGTGGTAGTCGTGGAATAAGTTTCATTCTCTCCTCTATGGTGTTCAATGTAGTACCTACCATGTTAGAGATATCTATGGTAGCAGGTATACTGGCCTACAAATTTGGAGCTCCCTTTGCGCTGATTACTTCCTTATCGGTTGCTGCTTATGTTATTTTCACACTGTCTATCACACAGTGGAGGACTAAGTTTAGGAAAGCCATGAATAGGGCGGATAATGATGCTAGTACAAGGGTTATTGATTCACTTATTAATTATGAGACTGTCAAATATTTTAATAATGAAGTGTATGAAGCTGATAATTATGACAAGTACCTGAAGAGATACGAAGATGCTGCTCTGAAAACCCAACGAAGTCTTGCTTTGTTGAACTTTGGTCAAAATATTATATTTAGTACTGCTCTTTCATCAGCAATGGTGCTGTGCTCTCATGGGATCATGGATGGAACGATGACTATTGGTGATTTGGTAATGGTGAATGGACTTCTCTTCCAACTATCTCTTCCACTTAATTTCCTTGGTAGTGTTTATCGTGAGACTATACAGAGTTTAGTTGACATGAAATCCATGTTTCAGTTACTTGAGGAAAGAGCAGACATTAGGGATAAAGAAAATGCACAGCCTCTTAGATTTAATGGGGGGAGTATCCAATTTGAGAATGTACATTTTAGTTACCTCACAGAAAGAAAGATACTAGATGGATTATCGTTTGTTTTGCCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCATTCTTAGATTGCTATTCAGGTTCTTTGATCCTAATTCTGGAAGTATAAAGATAGATAATCAAGATATTCGGGACATAACCCTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATATTGTACTTTTTAATGATACTATATTTCACAACATTCACTACGGTCGGCTTTCTGCAACAAAGGAGGAGGTCTATGAAGCTGCTCAGCAAGCAGCAATTCATAACACTATCATGAATTTTCCCGATAAATATTCAACTGTTGTCGGAGAGAGAGGGCTCAAGTTAAGTGGTGGTGAGAAGCAACGTATTGCCTTGGCTCGTTCATTCTTAAAAGCACCTGCAATTCTGTTGTGTGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGATATTTTAAGTGCGTTAAAGTCAGTAGCAAAAAATCGGACTTCCATATTCATTGCTCACAGGCTTACCACTGCAATGCAGTGTGATGAGATTATTGTCCTGGAAAATGGGAAGGTGATTGAGCAAGGATCCCATGAAGTACTCTTATCAAAAGCAGGAAGATATGCACAGCTGTGGGGACAACAAAATAACTCAATTGATGCACTTGATACAGCCATCAATGTGGGAGCATAA 2244 0.4198 MLAAAASASRNLIQRDASVGACSGSGNRVRSLFTVSVIGTAYPIRTKTCYSSHGYGIGFNVPKQRACPGLLFAVKGFLSDSSNSNSPHGRVPRPYLPHPSSSVDGRALFSTSTKDDGSQSQKPTSSTIAKPPPSLPDGQVADVKILRTLASYLWMKDNLEFRVRIIAALGLLVGAKVLNVQVPFLFKLAVDSLTTASGNAAALASSSSGMALFATPVAVLVGYGIARSGAAAFNELRTAIFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRIIDRGSRGISFILSSMVFNVVPTMLEISMVAGILAYKFGAPFALITSLSVAAYVIFTLSITQWRTKFRKAMNRADNDASTRVIDSLINYETVKYFNNEVYEADNYDKYLKRYEDAALKTQRSLALLNFGQNIIFSTALSSAMVLCSHGIMDGTMTIGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADIRDKENAQPLRFNGGSIQFENVHFSYLTERKILDGLSFVLPAGKSVAIVGTSGSGKSTILRLLFRFFDPNSGSIKIDNQDIRDITLESLRKSIGVVPQDIVLFNDTIFHNIHYGRLSATKEEVYEAAQQAAIHNTIMNFPDKYSTVVGERGLKLSGGEKQRIALARSFLKAPAILLCDEATSALDSTTEADILSALKSVAKNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHEVLLSKAGRYAQLWGQQNNSIDALDTAINVGA* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03242 747 Gene3D ABC transporter type 1, transmembrane domain 152 487 IPR036640 GO:0005524|GO:0016020
Phac8g03242 747 MobiDBLite consensus disorder prediction 104 132 - -
Phac8g03242 747 MobiDBLite consensus disorder prediction 83 135 - -
Phac8g03242 747 FunFam ATP-binding cassette sub-family B member 7 137 485 - -
Phac8g03242 747 SUPERFAMILY ABC transporter transmembrane region 151 476 IPR036640 GO:0005524|GO:0016020
Phac8g03242 747 Gene3D - 489 743 IPR027417 -
Phac8g03242 747 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 148 728 IPR039421 -
Phac8g03242 747 CDD ABC_6TM_ATM1_ABCB7 168 471 - -
Phac8g03242 747 Pfam ABC transporter 513 662 IPR003439 GO:0005524
Phac8g03242 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 732 IPR027417 -
Phac8g03242 747 FunFam ABC transporter B family member 25 489 743 - -
Phac8g03242 747 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 497 731 IPR003439 GO:0005524
Phac8g03242 747 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 166 463 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g03242 747 ProSitePatterns ABC transporters family signature. 634 648 IPR017871 GO:0005524|GO:0016887
Phac8g03242 747 Pfam ABC transporter transmembrane region 166 450 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g03242 747 SMART AAA_5 522 708 IPR003593 GO:0016887
Phac8g03242 747 CDD ABCC_ATM1_transporter 497 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03242 Phac-Chr8 40688226 40712332 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03242 333 733 Calmodulin-binding Proteins AT2G36910 36.893 8.61e-65 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03242 K05662 - gmx:100779975 1278.08