Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03240 ATGCTTGCTGCTGCTGCTTCAGCTTCTCGAAACCTTATTCAACGCGATGCCAGCGTCGGTGCTTGCAGTGGCAGTGGCAATCGAGTTCGCTCTCTTTTTACAGTTTCTGTGATCGGCACAGCCTACCCCATTCGCACTAAAACATGTTACAGTAGTCATGGTTATGGAATCGGTTTCAATGTCCCAAAACAGAGAGCGTGCCCAGGTTTGCTTTTTGCTGTAAAGGGGTTCCTCTCGGATTCATCAAATTCTAATTCTCCACATGGCAGAGTTCCCAGACCTTACCTACCACACCCTAGTTCAAGTGTGGATGGGCGAGCATTGTTCTCAACTTCAACTAAAGATGATGGAAGCCAAAGCCAAAAACCTACTTCTTCGACCATTGCTAAACCCCCACCATCACTTCCTGATGGGCAAGTTGCTGATGTGAAGATCCTACGCACACTTGCCAGTTACCTTTGGATGAAAGATAATCTTGAATTTCGGGTTCGGATTATTGCTGCATTGGGCTTACTTGTTGGGGCTAAGGTTTTGAATGTTCAGGTCCCGTTCTTGTTCAAGCTTGCAGTTGATTCGTTGACGACTGCCTCGGGGAATGCTGCTGCTCTTGCTTCGAGTTCAAGTGGGATGGCTCTTTTTGCAACCCCAGTGGCGGTGTTGGTTGGATATGGGATTGCGCGTTCAGGAGCTGCTGCTTTCAATGAACTGCGGACTGCTATATTTTCTAAGGTTGCACTGCGAACTATTCGATTAGTATCAAGGAAGGTCTTCTCACATTTGCATGACCTTGACCTTCGGTATCATCTAAGCCGAGAAACTGGTGCATTAAGTAGAATAATTGATCGTGGTAGTCGTGGAATAAGTTTCATTCTCTCCTCTATGGTGTTCAATGTAGTACCTACCATGTTAGAGATATCTATGGTAGCAGGTATACTGGCCTACAAATTTGGAGCTCCCTTTGCGCTGATTACTTCCTTATCGGTTGCTGCTTATGTTATTTTCACACTGTCTATCACACAGTGGAGGACTAAGTTTAGGAAAGCCATGAATAGGGCGGATAATGATGCTAGTACAAGGGTTATTGATTCACTTATTAATTATGAGACTGTCAAATATTTTAATAATGAAGTGTATGAAGCTGATAATTATGACAAGTACCTGAAGAGATACGAAGATGCTGCTCTGAAAACCCAACGAAGTCTTGCTTTGTTGAACTTTGGTCAAAATATTATATTTAGTACTGCTCTTTCATCAGCAATGGTGCTGTGCTCTCATGGGATCATGGATGGAACGATGACTATTGGTGATTTGGTAATGGTGAATGGACTTCTCTTCCAACTATCTCTTCCACTTAATTTCCTTGGTAGTGTTTATCGTGAGACTATACAGAGTTTAGTTGACATGAAATCCATGTTTCAGTTACTTGAGGAAAGAGCAGACATTAGGGATAAAGAAAATGCACAGCCTCTTAGATTTAATGGGGGGAGTATCCAATTTGAGAATGTACATTTTAGTTACCTCACAGAAAGAAAGATACTAGATGGATTATCGTTTGTTTTGCCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCATTCTTAGATTGCTATTCAGGTTCTTTGATCCTAATTCTGGAAGTATAAAGATAGATAATCAAGATATTCGGGACATAACCCTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATATTGTACTTTTTAATGATACTATATTTCACAACATTCACTACGGTCGGCTTTCTGCAACAAAGGAGGAGGTCTATGAAGCTGCTCAGCAAGCAGCAATTCATAACACTATCATGAATTTTCCCGATAAATATTCAACTGTTGTCGGAGAGAGAGGGCTCAAGTTAAGTGGTGGTGAGAAGCAACGTATTGCCTTGGCTCGTTCATTCTTAAAAGCACCTGCAATTCTGTGA 1968 0.4207 MLAAAASASRNLIQRDASVGACSGSGNRVRSLFTVSVIGTAYPIRTKTCYSSHGYGIGFNVPKQRACPGLLFAVKGFLSDSSNSNSPHGRVPRPYLPHPSSSVDGRALFSTSTKDDGSQSQKPTSSTIAKPPPSLPDGQVADVKILRTLASYLWMKDNLEFRVRIIAALGLLVGAKVLNVQVPFLFKLAVDSLTTASGNAAALASSSSGMALFATPVAVLVGYGIARSGAAAFNELRTAIFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRIIDRGSRGISFILSSMVFNVVPTMLEISMVAGILAYKFGAPFALITSLSVAAYVIFTLSITQWRTKFRKAMNRADNDASTRVIDSLINYETVKYFNNEVYEADNYDKYLKRYEDAALKTQRSLALLNFGQNIIFSTALSSAMVLCSHGIMDGTMTIGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADIRDKENAQPLRFNGGSIQFENVHFSYLTERKILDGLSFVLPAGKSVAIVGTSGSGKSTILRLLFRFFDPNSGSIKIDNQDIRDITLESLRKSIGVVPQDIVLFNDTIFHNIHYGRLSATKEEVYEAAQQAAIHNTIMNFPDKYSTVVGERGLKLSGGEKQRIALARSFLKAPAIL* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03240 655 Pfam ABC transporter 513 655 IPR003439 GO:0005524
Phac8g03240 655 MobiDBLite consensus disorder prediction 104 132 - -
Phac8g03240 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 655 IPR027417 -
Phac8g03240 655 MobiDBLite consensus disorder prediction 83 135 - -
Phac8g03240 655 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 148 655 IPR039421 -
Phac8g03240 655 CDD ABC_6TM_ATM1_ABCB7 168 471 - -
Phac8g03240 655 SUPERFAMILY ABC transporter transmembrane region 151 476 IPR036640 GO:0005524|GO:0016020
Phac8g03240 655 Pfam ABC transporter transmembrane region 166 450 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g03240 655 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 166 463 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g03240 655 Gene3D - 492 655 IPR027417 -
Phac8g03240 655 ProSitePatterns ABC transporters family signature. 634 648 IPR017871 GO:0005524|GO:0016887
Phac8g03240 655 Gene3D ABC transporter type 1, transmembrane domain 152 487 IPR036640 GO:0005524|GO:0016020
Phac8g03240 655 FunFam ATP-binding cassette sub-family B member 7 137 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03240 Phac-Chr8 40688226 40712332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03240 333 655 Calmodulin-binding Proteins AT2G36910 34.639 7.44e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03240 K05662 - gmx:100779975 1116.68