Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03213 ATGGAGCAGGAACAGCAAAACCTTGAAAGCTTCTTAACATGGGCAGCGCAACTTGGAATATCGGACTCAACAACACGCACCGACCAACCTCGACACTCTCCTTCCTCATGTTTGGGTTCTTCTTTATGTATCGCTCATTTTCCTCACTCTGGCGGGAGAGGTTTGGGTGCTGTGAGAGACCTTAGGAGGGGGGAAATTGTTCTCAGTGTTCCAAAATCTGCTTTAATGACAAGAGAGAATGTTATGGAAGATAAAAAACTCTGTTTTGCTGTCAATAGACACTCTTGTCTCTCCTCAGCTCAGATATTGATCGTTTGTTTGTTGTATGAAATGTGTAAAGGGAAGACTTCAAGGTGGCATCCTTACCTCATGCATTTGCCACACACTTATGACATACTAGCCATGTTTGATGAATTTGAGAAGCGTGCTCTGCAAGTGGATGAAGCTGTGTGGGTTACTGAAAAAGCTATACTAAAGGCCAAATCAGAGTGGAAAGAAGCTCATGCTTTAATGGAAGATCTCATGTTTAGGCCCCAGTTTTTAACATTTAAGGCTTGGGTTTGGGCTGCTGCAACGATATCTTCTCGAACATTGCATGTACCATGGGATGAAGCCGGGTGTTTATGCCCCGTGGGGGACTTGTTTAATTATGATGCACCTGGAGAGGAGTCATCTGACGTTGAGGATTTAGAACATTTGCTATCAAACTGTTCCATTCACGATACAAACTTATTAAATGGAGACAAGAATATAGTGGTAGATGCAGAACAGCTTGATTCTCATTCTCAGAGATTAACTGATGGCGGGTTTGAGGAAAATGTTAATGCATATTGCTTCTATGCTAGGGCACATTACAAGAAAGGTGATCAGGTTCTATTATGCTATGGAACTTACACTAATTTGGAGCTTCTTGAACACTATGGCTTTCTCCTACAAGAAAATCCAAATGACAAAGTTTTTATCCCTTTGGATCCAGCTGTATATATTTCCACTTCATGGTCTATGGAATCACTCTATATCCATCATAATGGGAAGCCTTCATTTGCACTACTTGCTGCATTGCGGTTGTGGGCAACTCCTCAAAACAAGAGGAAGTCTGTCGGACATCTTGTGTATTCTGGTTCTCAACTGTCTACAGACAATGAAATTTTCATCACGAAATGGCTGTCCAAAACTTGTGCTACTGTGTTAAAGAATCTGCCAACATCTATCGATGAAGACACCTTGCTCCTGAATGCAATGGACAGTAGCCAAGATTTTTTCACTTTCATGGAGATCACAAAACTTATGTCTTCCAAGGATGAGATCTATACATTCTTAGAAACACATAATATGAGGGATGCACATAGTTTCACTGAAGTAATTTTATCTAGAAAAGCAAGAAGGTCCATGGATAGGTGGAAATTAGCTGTCCAATGGAGACTGAAGTATAAGAAAGTCCTTTTTGATTGTATCTCTTATTGCAATGAAATACTAGATTCTTTCATAAAATAA 1494 0.4029 MEQEQQNLESFLTWAAQLGISDSTTRTDQPRHSPSSCLGSSLCIAHFPHSGGRGLGAVRDLRRGEIVLSVPKSALMTRENVMEDKKLCFAVNRHSCLSSAQILIVCLLYEMCKGKTSRWHPYLMHLPHTYDILAMFDEFEKRALQVDEAVWVTEKAILKAKSEWKEAHALMEDLMFRPQFLTFKAWVWAAATISSRTLHVPWDEAGCLCPVGDLFNYDAPGEESSDVEDLEHLLSNCSIHDTNLLNGDKNIVVDAEQLDSHSQRLTDGGFEENVNAYCFYARAHYKKGDQVLLCYGTYTNLELLEHYGFLLQENPNDKVFIPLDPAVYISTSWSMESLYIHHNGKPSFALLAALRLWATPQNKRKSVGHLVYSGSQLSTDNEIFITKWLSKTCATVLKNLPTSIDEDTLLLNAMDSSQDFFTFMEITKLMSSKDEIYTFLETHNMRDAHSFTEVILSRKARRSMDRWKLAVQWRLKYKKVLFDCISYCNEILDSFIK* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03213 497 Gene3D - 329 495 IPR036464 -
Phac8g03213 497 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 427 - -
Phac8g03213 497 SUPERFAMILY SET domain 7 314 IPR046341 -
Phac8g03213 497 FunFam Protein SET DOMAIN GROUP 40 314 429 - -
Phac8g03213 497 ProSiteProfiles SET domain profile. 40 296 IPR001214 GO:0005515
Phac8g03213 497 Pfam Rubisco LSMT substrate-binding 345 481 IPR015353 -
Phac8g03213 497 FunFam Protein SET DOMAIN GROUP 40 8 310 - -
Phac8g03213 497 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 306 487 IPR036464 -
Phac8g03213 497 CDD SET_LSMT 41 310 - -
Phac8g03213 497 Pfam SET domain 52 296 IPR001214 GO:0005515
Phac8g03213 497 Gene3D set domain protein methyltransferase, domain 1 4 310 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac8g03213 SET 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03213 - - gmx:100787452 899.427