Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03211 ATGGCACCTGTTTTGCCTCCCGGTTTTAGGTTCCACCCTACTGACGAAGAACTTGTTGCTTATTACCTCAAAAGGAAGATCAATGGCCGAAAGATTGAGTTGGAAATCATTCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTACCTGGGAAATCATTGTTACCGGGGAAGGATTTGGAGTGGTATTTCTTTAGTCCTCGTGATAGAAAATACCCAAATGGATCAAGAACAAACCGTGCAACAAAATCTGGGTATTGGAAGGCCACAGGGAAGGATAGGAAAGTAAATTCGAAGGCTCGATCTGTGGGTATGAAGAAAACCCTAGTTTATTATCGAGGAAGAGCACCCCACGGCTCTCGCACAAACTGGGTTATGCATGAATATCGTCTCGATGAGAGAGAATGCGAAACTGCTTCAGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGTTGAAGAAGACTGCAGTGATTCCTCAAAAAGTTGAGGGGCATTATGTTGAAGTTCCCAATGTGAATCAGATCACAAGCGATCAATCATCAAGCATTGAACTATACTCTGAAGGAAGGGGCGAAGATTTAGATAGCTCTAATTATTTTATGTCTGTGAATACTTGTTCACCCCACAATGTTGGAATTGAGACTCCTCTCAATATCAGTGGTGGAACCACCACGGATCATGAGAAATGGTCACACGTCTCATTACAAGATCCAATGTTTAGTCTTCCAACTTCATATCCTCATTTTGGAGCCATATACCCTCCATCCAAGGTGGACATAGCACTAGAGTGTGCAAGAATGCAACATAGGTTTGTTATGCCCCCTTTGGAGGTGGATGACTTCCCTCAAGTGGGAATCTCAGAGCTGAAAATGACACAAGCCTCTAGTTCCATGCAAGGAAGCAGACCTGAAACGGATATCTTACAGGAAATTCTTTCAGTGGCTCATGCCTCTCAGGAATTAATAAACCAATCCAGCTATTCGCAGGAATGGGGTGGCAATGATTATTATTATGCTCCTCGTGATGACGATTTTACCTTCATGGTTGGCACTAGTTACAATCATTCAAATGAAATGAGCTCAGCGAGGTATGTTGACAAAGCATGGGAAGATGCAAACACAAGGACCATAGAGATCGGAGATATGGATCAAGAATTTAAGGCAGAGAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGAGAAGATTTAGAAAAGATGGAAGAACAAAATATTGTCCCAATAGAGGATATTTCAAGCCTCCAAACTAACATGAAAGAAAATGAGGTGCAAGAATTTGAGCAACACAACATGGAACACAATGACACTGAAATCAATGATTTCTCATTGGGTTTCATCAATGATGGCGACCCTACCGAGAACTTCACAGAAGATGGTAACAGTGATGATTATTCAGGTTCTCCAAGTTTTGAGGTTGTTGAGGAAATAAAGGTCAATCGTGGAATGTTTGTTTCGACTGGTCAAGTGGCCGAGACATTCTTTCACCAAATGGTTCCATCACAAACAGTCCAAGTTCAGCTTAATACAGTGATGGCACACGATCATTATGTAGAGAATGCAGAAGCAATGCTGTTGATAATGGAGGACCAGGGGTCTTTAAGGAAGGTTAAGGCCTATGTGATGGGGAAGCTACTGAAGCCATCAATGACAATAGCAAGTGCAATTGTATTCGTCTTTGCACTTGTGTTGATGCATTATGCTTTCATAAAGAGAGAAGTGAAAATTTGGAATGAGACATGTTGCAGTAATAGTGGTAGCATCATGAAGAAAACGAATCAATCATCTCAGATACTGAAATGGAATGAGCCAAATGAGGTTTGGTTTGTTGGTATCAAAAGTGAGAAAGGATTAAGTGCAGTCTTGAAGAAAATAGGCATTTTTCTCACTATATCCTTTGCTCTTTGTACCATGTGGGCTAACCACAATTGA 1956 0.4146 MAPVLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSKARSVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETASGLQDAYALCRVLKKTAVIPQKVEGHYVEVPNVNQITSDQSSSIELYSEGRGEDLDSSNYFMSVNTCSPHNVGIETPLNISGGTTTDHEKWSHVSLQDPMFSLPTSYPHFGAIYPPSKVDIALECARMQHRFVMPPLEVDDFPQVGISELKMTQASSSMQGSRPETDILQEILSVAHASQELINQSSYSQEWGGNDYYYAPRDDDFTFMVGTSYNHSNEMSSARYVDKAWEDANTRTIEIGDMDQEFKAERMVENLRWVGMSREDLEKMEEQNIVPIEDISSLQTNMKENEVQEFEQHNMEHNDTEINDFSLGFINDGDPTENFTEDGNSDDYSGSPSFEVVEEIKVNRGMFVSTGQVAETFFHQMVPSQTVQVQLNTVMAHDHYVENAEAMLLIMEDQGSLRKVKAYVMGKLLKPSMTIASAIVFVFALVLMHYAFIKREVKIWNETCCSNSGSIMKKTNQSSQILKWNEPNEVWFVGIKSEKGLSAVLKKIGIFLTISFALCTMWANHN* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03211 651 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Phac8g03211 651 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 288 - -
Phac8g03211 651 FunFam Nac domain-containing protein 86 14 158 - -
Phac8g03211 651 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Phac8g03211 651 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Phac8g03211 651 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03211 Phac-Chr8 40474013 40478119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03211 1 646 NAC Transcription Factor Family AT1G65910 43.284 8.97e-158 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac8g03211 NAM 4.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03211 - - gmx:100809019 1048.5