Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03193 ATGGTTCTCTCCAAAACGGCCTCGCAGACGGACGTTTCTGTCCATTCAACCTTCGCCTCTCGCTATGTGCGCACTGCTCTTCCAAGGTTCAAGATGGGAGAGCAATCGATCCCGAAGGAAGCGGCGTACCAGATCATAAACGACGAGCTGATGTTAGATGGAAATCCGAGGCTGAACCTGGCGTCGTTTGTGACGACGTGGATGGAGCCTGAATGTGACAAACTCATTATGGCTGCCATTAACAAAAACTATGTGGACATGGATGAGTACCCTGTCACCACTGAACTCCAGAACCGTTGCGTTAACATGATAGCTCACCTTTTCAATGCACCGCTCGAAGACTCAGAAATTGCAGTTGGTGTTGGTACTGTTGGCTCATCAGAGGCCATAATGTTGGCTGGATTGGCATTCAAAAGGAGGTGGCAGAATAGAAGGAAAGAACAAGGGAAGTCTTGTGATAGTCCCAACATTGTTACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCGAGGTACTTTGAGGTGGAGCTGAAAGAGGTGAAGCTGAGTGATGGATACTTTGTAATGGACCCTGAAAAAGCAGCGGAAATGGTGGATGAGAACACCATTTGTGTTGCTGCTATCCTTGGTTCCACTTTGAACGGGGAGTTTGAAGATGTGAAGCGCTTAAATGATCTGCTAGTACAAAAGAATCAGGAAACTGGATGGGACACTCCAATTCATGTGGATGCAGCCAGTGGTGGATTCATTGCACCCTTTATTTATCCAGAGCTTGAGTGGGACTTTCGGTTACCACTAGTGAAGAGCATCAATGTTAGTGGACACAAATATGGTCTAGTCTATGCTGGAATTGGTTGGGTGATTTGGAGAACCAAGGAAGACCTTCCTGAGGAACTCATTTTCCACATTAACTATCTTGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAATTATTGCTCAGTACTACCAACTAATTCGATTAGGTTATGAGGGATATAAAATGGTGATGGAAAACTGTAGAGACAACATGGGAGTGCTTAAGGAAGGACTAGAGGGAACTGGAAGGTTTAACATTGTGTCTAAAGACATTGGTGTCCCATTGGTGGCCTTCACTTTGAAGGACCACAGCCACTTCAATGAGTTCCAAATCTCTGACCTGCTGAGGCGCTATGGATGGATAGTGCCAGCATACACTATGCCCCCAGATGCAGAACATGTCACAGTGCTTCGTGTTGTGGTTAGGGAGGATTTTTCTCGCACCCTTGCGGAGCGTCTTGTCACTGATATCACTAAAGTGGTGCACGAGCTGGAGCAGCTTCCTGCTAGGGTAATCAGCAGTGTAACGTCTACTGGAGAAGAAGGTGAAGACACTGAGGGCAAAGTATTGCTTGCCAAGAAGAGTGAACTAGAGACGCAGAGGGAAATCACATCAGTTTGGAAGAAGTTTGTTATGGACAAGAAGAAGATGAATGGCGTTTGTTAG 1506 0.4635 MVLSKTASQTDVSVHSTFASRYVRTALPRFKMGEQSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDSEIAVGVGTVGSSEAIMLAGLAFKRRWQNRRKEQGKSCDSPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYFVMDPEKAAEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVQKNQETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGYEGYKMVMENCRDNMGVLKEGLEGTGRFNIVSKDIGVPLVAFTLKDHSHFNEFQISDLLRRYGWIVPAYTMPPDAEHVTVLRVVVREDFSRTLAERLVTDITKVVHELEQLPARVISSVTSTGEEGEDTEGKVLLAKKSELETQREITSVWKKFVMDKKKMNGVC* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03193 501 Gene3D - 361 448 - -
Phac8g03193 501 FunFam Glutamate decarboxylase 66 360 - -
Phac8g03193 501 Gene3D - 66 359 IPR015421 GO:0003824
Phac8g03193 501 FunFam Glutamate decarboxylase 361 448 - -
Phac8g03193 501 Pfam Pyridoxal-dependent decarboxylase conserved domain 37 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Phac8g03193 501 Gene3D - 1 65 - -
Phac8g03193 501 PANTHER GLUTAMATE DECARBOXYLASE 1 501 IPR010107 GO:0004351|GO:0006536|GO:0030170
Phac8g03193 501 NCBIfam glutamate decarboxylase 16 445 IPR010107 GO:0004351|GO:0006536|GO:0030170
Phac8g03193 501 FunFam Glutamate decarboxylase 1 65 - -
Phac8g03193 501 SUPERFAMILY PLP-dependent transferases 15 445 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03193 Phac-Chr8 40339069 40344363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03193 1 501 Calmodulin-binding Proteins AT5G17330 81.873 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03193 K01580 - gmx:100791696 928.317