Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03177 ATGAAACCAAACTTTGATCTTGAAGTTGAGGCATATGCAGAATATGAATCTGAAGTTAGCAGCCAGGTTGCTTCCAATGTTTCTATTTGTAGTGACAGCCTCACTAACATTTCCCACACCACAAATCCAATAGGGATTCATCCTAACTTAGATGCTATTTCACTTGACTTAACTCTCAACTTCAAGAACAGTGAGCCAGGGGGAAGAGATTCAATAGGATTCTCATTCTCAAGCACTAGCGAGAGCAGCAATGAACCTGCCTCTCAAACCACAGCAGCGACCATACCACGAGTCTTCTCTTGCAATTACTGTAAGCGCAAATTTTTCAGCTCTCAGGCTCTTGGTGGACACCAGAATGCACACAAGAGAGAAAGAACATTAGCAAAAAGGGCTTTGAGAATGGGATTTTTCTCTGAAAGGTATGCCAATCTAGCATCTCTCCCTCTGCATGGTTCTTTTAGGTCCTTAGGAATAAAGGCACACTCTTCACTGCACCATGGCTTCTCACCAACAATGAGGCCTCCTGAGGTAAAAAACAATGCAAGATTTGATCAAGGGTATGTTGGCATCCCAGTATTCTTGGAGGATGATGAGTCAGATTTGTTGTGGCCGGGTAGTTTTCGTCCGGTTGTCGAGGCAGGTGATAGTCATCAGAATTTCATACTGACTGGAAGTTCAGATTTGAGCTTTACTGGGGTAAATCCACCTGTAGACATAGAGAACTCAATACCAGATTTGACTTTGAAACTTTGA 753 0.429 MKPNFDLEVEAYAEYESEVSSQVASNVSICSDSLTNISHTTNPIGIHPNLDAISLDLTLNFKNSEPGGRDSIGFSFSSTSESSNEPASQTTAATIPRVFSCNYCKRKFFSSQALGGHQNAHKRERTLAKRALRMGFFSERYANLASLPLHGSFRSLGIKAHSSLHHGFSPTMRPPEVKNNARFDQGYVGIPVFLEDDESDLLWPGSFRPVVEAGDSHQNFILTGSSDLSFTGVNPPVDIENSIPDLTLKL* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03177 250 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
Phac8g03177 250 SUPERFAMILY beta-beta-alpha zinc fingers 97 126 IPR036236 -
Phac8g03177 250 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Phac8g03177 250 FunFam Zinc finger protein 2 76 145 - -
Phac8g03177 250 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 53 171 IPR044246 GO:0009788
Phac8g03177 250 Gene3D Classic Zinc Finger 77 142 - -
Phac8g03177 250 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03177 Phac-Chr8 40243691 40247199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03177 81 250 C2H2 Transcription Factor Family AT1G66140 51.244 8.73e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac8g03177 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03177 - - gmx:100788768 440.654