Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03175 ATGGTGAACACTACCACCGCCGCCGCCACCTACTTTCTAAATCCTCTACCCTTCGTCATTTTCCTAACCATCATCGCCCTTTTTGCAAACTCCCAAGACGACGTTTCAGTAATGCTGGCTCTCAAGAACAGCCTCAACCCGCCGGGGTGGACCGGCCCGGACCCATGCATGTGGGACCACGTCAGGTGCTCCGAAGATAAACGGGTCACCCGGATCCAAATCGGGCGCCTCAATCTCCAAGGTACTCTCCCTGCAACCCTTCACAACTTGACCCAGTTGCAACAGTTGGAGCTCCAATACAACAACATCTCGGGGCCCATTCCCTCGCTTAACGGCTTGACCAACCTCCGTGTCTTCATTGCCAGCAACAACCGCTTCTCCGCCGTCCCCGCCGACTTCTTCGCCGGCATGCCACAGCTCCAGGCGGTGGAGATCGACAACAACCCGTTTGAGCCCTGGGAGATTCCTCAGACTCTCCGAAACGCTTCTGTGCTTCAGAACTTCTCTGCCAACTCTGCCAACGTCAGAGGCACTTTGCCGGATTTCTTCAGCTCCGAGGTGTTTCCTAGTTTGACCCTTTTGCACTTGGCCATCAATAACCTCGAGGGGACGTTGCCTTTGAGCTTTTCTGGCTCTCAGATTCAGTCTTTGTGGTTGAATGGGCAGAAGAGCGTTAACAGGCTTGGTGGCAGTGTTGCTGTTTTGCAGAACATGACTTTATTGACGGAGGTTTGGTTGCATTCCAATGCTTTTACGGGTCCCTTACCTGATTTTTCTGGGTTGAAGAGTTTGCAGGTTCTGAGTTTGAGGGATAACAGGTTTACTGGTCCAGTTCCGGCTTCGTTGGTGGGTCTCAAGACACTTGAAGTTGTGAACTTGACTAATAACTTGTTTCAGGGTCCTGTGCCGGTGTTTGGCAATGGAGTTGAGGTGGATAACGAAAAGGATTCCAATAGTTTTTGTTTGTCAGGACCTGGTGATTGTGATCCCAGGGTGCAGGTTCTTCTTTCTGTTGTTGGGCTTATGGGGTATCCTCAAAGGTTTGGTGACAGTTGGAAGGGGAATGATCCTTGTGCTGGTTGGATTGGAATTTCTTGTGTAGATGGGAATATAACTATTGTTAATTTTCAGAAGATGCAACTGAGTGGTGAGATATCCCCGGACTTGTCAAAGATTAAATCTTTGCAAAGAATAGTACTTGCGGATAACAATCTCACTGGTTCGATTCCAGTAGAGCTTACTACTTTGCCTCGGCTTAGTCTATTGAATGTTGCAAACAATCAGCTTTATGGGAAGGTGCCGAGTTTTAGAAGTAATGTAGTTGTGAGTACTAGTGGTAATGTTGATATAGGGAAGGATAAGAGTAGCCAGTCCCCTCAGGGTTCAGTGTCTCCAACGGCTCCCAATTCAAAGGGAGAAAATGGGGGTTCTGGAAATGGTGGCAAAAAGTCTTCTTCCCACGTGGGAGTGATCGTGTTTTCGGTGATTGGGGCGGTGTTTGTGGTTTCTATGATTGGTTTCTTGGTTTTCTGCCTGTTTAGGATGAAGCAAAAGAAGTTGAGCAGGGTCCAGAGCCCAAATGCTCTAGTTATTCATCCTAGGCATTCGGGGTCGGATAATGAGAGTGTGAAGATAACAGTTGCAGGTTCAAGTGTCAGTGTTGGTGGTGCTAGTGAAACGCGAACCGTACCTGGCAGTGAGGCAGGAGATATCCAAATGGTTGAAGCCGGAAACATGGTCATTTCCATACAAGTTCTGAGGAATGTCACGGATAACTTCAGTCCGAAGAACATATTGGGACAAGGAGGTTTTGGAACGGTCTATAGAGGTGAACTCCATGATGGTACAAGAATTGCAGTGAAAAGAATGGAGTGTGGGGCAATAACAGGGAAGGGTGCGGCAGAATTCAAGTCTGAAATTGCTGTTTTAACAAAGGTTCGCCACCGGCATCTTGTGGCTCTTCTAGGTTACTGCTTGGATGGGAATGAGAAGCTGCTTGTGTACGAGTACATGCCTCAAGGAACATTGAGTAGGCATCTTTTCAACTGGCCAGAGGAAGGACTGGAACCACTGGAGTGGAATAGAAGATTGACAATTGCCTTAGATGTGGCAAGGGGTGTCGAGTACCTCCATGGCTTGGCCCATCAAAGCTTCATACACAGGGACTTAAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTTGCAGATTTTGGTCTTGTGCGTCTTGCTCCGGAAGGAAAAGCTTCTATAGAAACAAGAATTGCTGGAACATTTGGATATTTGGCACCTGAGTATGCAGTCACTGGCCGTGTGACAACTAAAGTTGACGTGTTCAGCTTTGGGGTAATATTGATGGAGGTGATAACAGGAAGAAAAGCACTTGATGAGACTCAACCCGAGGATAGCATGCACCTTGTAACATGGTTCCGCAGAATGTCCATAAATAAGGACTCATTCCGCAAGGCCATTGACTCCACAATTGATCTCAACGAGGAAACTCTTGCCAGTATTCACACTGTAGCAGAGTTAGCTGGCCACTGTTGTGCAAGGGAGCCATATCAAAGGCCTGACATGGGTCATGCTGTTAACGTGCTTTCTTCTCTTGTTGAACTTTGGAAACCATCTGATCAGAATGCAGAAGATATATATGGCATTGACCTTGACATGTCCTTGCCACAAGCACTTAAGAAGTGGCAGGCTTATGAAGGTAGAAGCCAAATGGAGTCCTCTTCTTCATCTTCTCTTCTACCAAGCTTGGATAACACACAGACAAGTATACCTACTCGCCCATATGGATTTGCGGATTCTTTCACATCAGCAGATGGTAGGTGA 2844 0.4736 MVNTTTAAATYFLNPLPFVIFLTIIALFANSQDDVSVMLALKNSLNPPGWTGPDPCMWDHVRCSEDKRVTRIQIGRLNLQGTLPATLHNLTQLQQLELQYNNISGPIPSLNGLTNLRVFIASNNRFSAVPADFFAGMPQLQAVEIDNNPFEPWEIPQTLRNASVLQNFSANSANVRGTLPDFFSSEVFPSLTLLHLAINNLEGTLPLSFSGSQIQSLWLNGQKSVNRLGGSVAVLQNMTLLTEVWLHSNAFTGPLPDFSGLKSLQVLSLRDNRFTGPVPASLVGLKTLEVVNLTNNLFQGPVPVFGNGVEVDNEKDSNSFCLSGPGDCDPRVQVLLSVVGLMGYPQRFGDSWKGNDPCAGWIGISCVDGNITIVNFQKMQLSGEISPDLSKIKSLQRIVLADNNLTGSIPVELTTLPRLSLLNVANNQLYGKVPSFRSNVVVSTSGNVDIGKDKSSQSPQGSVSPTAPNSKGENGGSGNGGKKSSSHVGVIVFSVIGAVFVVSMIGFLVFCLFRMKQKKLSRVQSPNALVIHPRHSGSDNESVKITVAGSSVSVGGASETRTVPGSEAGDIQMVEAGNMVISIQVLRNVTDNFSPKNILGQGGFGTVYRGELHDGTRIAVKRMECGAITGKGAAEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLEPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMEVITGRKALDETQPEDSMHLVTWFRRMSINKDSFRKAIDSTIDLNEETLASIHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDQNAEDIYGIDLDMSLPQALKKWQAYEGRSQMESSSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03175 947 Gene3D Transferase(Phosphotransferase) domain 1 671 891 - -
Phac8g03175 947 MobiDBLite consensus disorder prediction 447 483 - -
Phac8g03175 947 FunFam receptor protein kinase TMK1 555 670 - -
Phac8g03175 947 SUPERFAMILY Protein kinase-like (PK-like) 571 877 IPR011009 -
Phac8g03175 947 Pfam Leucine rich repeat N-terminal domain 333 366 IPR013210 -
Phac8g03175 947 Pfam Leucine rich repeat N-terminal domain 32 64 IPR013210 -
Phac8g03175 947 Gene3D Ribonuclease Inhibitor 31 328 IPR032675 -
Phac8g03175 947 PANTHER OSJNBA0070M12.3 PROTEIN 19 947 - -
Phac8g03175 947 SUPERFAMILY L domain-like 63 437 - -
Phac8g03175 947 FunFam Leucine-rich repeat receptor-like kinase 330 453 - -
Phac8g03175 947 ProSitePatterns Protein kinases ATP-binding region signature. 599 621 IPR017441 GO:0005524
Phac8g03175 947 MobiDBLite consensus disorder prediction 911 936 - -
Phac8g03175 947 ProSiteProfiles Protein kinase domain profile. 593 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03175 947 SMART serkin_6 593 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g03175 947 CDD STKc_IRAK 599 872 - -
Phac8g03175 947 Pfam Protein tyrosine and serine/threonine kinase 597 865 IPR001245 GO:0004672|GO:0006468
Phac8g03175 947 FunFam receptor protein kinase TMK1 671 888 - -
Phac8g03175 947 ProSiteProfiles Leucine-rich repeat profile. 92 114 IPR001611 GO:0005515
Phac8g03175 947 MobiDBLite consensus disorder prediction 911 947 - -
Phac8g03175 947 FunFam Receptor-like kinase TMK4 32 326 - -
Phac8g03175 947 Gene3D Ribonuclease Inhibitor 330 454 IPR032675 -
Phac8g03175 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Phac8g03175 947 Gene3D Phosphorylase Kinase; domain 1 554 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03175 Phac-Chr8 40223918 40228903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03175 78 875 Receptor kinase-like Gene Family AT5G07280 30.843 7.88e-83 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Phac8g03175 PK_Tyr_Ser-Thr 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03175 K00924 - gmx:100305404 1608.58